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Detecting meaningful structure in neural activity and connectivity data is challenging in the presence of hidden nonlinearities, where traditional eigenvalue-based methods may be misleading. We introduce a novel approach to matrix analysis,…

Neurons and Cognition · Quantitative Biology 2015-11-24 Chad Giusti , Eva Pastalkova , Carina Curto , Vladimir Itskov

We analyze the computational aspects of detecting topological order in a quantum many-body system. We contrast the widely used topological entanglement entropy with a recently introduced operational definition for topological order based on…

Quantum Physics · Physics 2025-05-09 Louis Fraatz , Amit Jamadagni , Hendrik Weimer

In the field of data-driven 3D shape analysis and generation, the estimation of global topological features from localized representations such as point clouds, voxels, and neural implicit fields is a longstanding challenge. This paper…

Computer Vision and Pattern Recognition · Computer Science 2024-12-03 Yihao Luo

Clustering algorithms remain valuable tools for grouping and summarizing the most important aspects of data. Example areas where this is the case include image segmentation, dimension reduction, signals analysis, model order reduction,…

Numerical Analysis · Mathematics 2024-12-24 Guy B. Oldaker , Maria Emelianenko

Polymer networks invariably possess topological inhomogeneities in the form of loops and dangling ends. The macroscopic properties of such materials are directly dependent on the local cyclic topology around nodes and chains. Here, a new…

Materials Science · Physics 2024-06-27 Devosmita Sen , Bradley D. Olsen

A topological computation method, called the MGSTD method, is applied to time-series data obtained from meteorological measurement. The method gives decomposition of the dynamics into invariant sets and gradient-like transitions between…

Dynamical Systems · Mathematics 2019-05-31 Hidetoshi Morita , Masaru Inatsu , Hiroshi Kokubu

We present a statistical mechanical description of randomly packed spherical particles, where the average coordination number is treated as a macroscopic thermodynamic variable. The overall packing entropy is shown to have two…

Soft Condensed Matter · Physics 2022-02-02 Jack A. Logan , Alexei V. Tkachenko

We introduce the problem of partitioning 2D regions (usually convex regions) into mutually congruent pieces ('tiles').

Combinatorics · Mathematics 2010-08-03 R. Nandakumar

This paper presents an adaptive convolutional neural network (CNN) architecture that can automate diverse topology optimization (TO) problems having different underlying physics. The architecture uses the encoder-decoder networks with dense…

Computational Engineering, Finance, and Science · Computer Science 2025-09-10 Khaish Singh Chadha , Prabhat Kumar

Deep hedging uses recurrent neural networks to hedge financial products that cannot be fully hedged in incomplete markets. Previous work in this area focuses on minimizing some measure of quadratic hedging error by calculating pathwise…

Mathematical Finance · Quantitative Finance 2025-10-21 Alok Das , Kiseop Lee

Edge-centric distributed computations have appeared as a recent technique to improve the shortcomings of think-like-a-vertex algorithms on large scale-free networks. In order to increase parallelism on this model, edge partitioning -…

Data Structures and Algorithms · Computer Science 2018-10-12 Sebastian Schlag , Christian Schulz , Daniel Seemaier , Darren Strash

Topological data analysis (TDA) has become an attractive area for the application of quantum computing. Recent advances have uncovered many interesting connections between the two fields. On one hand, complexity theoretic results show that…

Quantum Physics · Physics 2025-11-06 Nhat A. Nghiem

The structure of topological spaces is analysed here through the lenses of fibrous preorders. Each topological space has an associated fibrous preorder and those fibrous preorders which return a topological space are called spacial. A…

General Topology · Mathematics 2021-02-22 Nelson Martins-Ferreira

In this paper we study the homology and cohomology of confguration spaces of two distinct particles on a graph. Our main tool is intersection theory for cycles in graphs. We obtain an explicit description of the cohomology algebra of the…

Algebraic Topology · Mathematics 2009-03-13 Kathryn Barnett , Michael Farber

We report on the implementation of an algorithm for computing the set of all regular triangulations of finitely many points in Euclidean space. This algorithm, which we call down-flip reverse search, can be restricted, e.g., to computing…

Combinatorics · Mathematics 2018-10-30 Charles Jordan , Michael Joswig , Lars Kastner

Classical topological concepts are applied to understand high performance computing simulations of molecules writhing in three dimensional space. These simulations produce peta-bytes of floating point data, to describe 3 dimensional changes…

Geometric Topology · Mathematics 2013-04-23 J. Li , T. J. Peters , K. E. Jordan

Topological data analysis (TDA), while abstract, allows a characterization of time-series data obtained from nonlinear and complex dynamical systems. Though it is surprising that such an abstract measure of structure - counting pieces and…

Computational Geometry · Computer Science 2020-01-07 Nicole Sanderson , Elliott Shugerman , Samantha Molnar , James D. Meiss , Elizabeth Bradley

Through the use of examples, we explain one way in which applied topology has evolved since the birth of persistent homology in the early 2000s. The first applications of topology to data emphasized the global shape of a dataset, such as…

Algebraic Topology · Mathematics 2021-04-23 Henry Adams , Michael Moy

In a previous work of the authors, a result to algorithmically compute the topology types of the level curves of an algebraic surface, is given. From this result, here we derive applications based on level curves to determine some…

Algebraic Geometry · Mathematics 2007-10-18 J. G. Alcazar , J. R. Sendra

Topological deep learning is a rapidly growing field that pertains to the development of deep learning models for data supported on topological domains such as simplicial complexes, cell complexes, and hypergraphs, which generalize many…

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