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Many questions in neuroscience involve understanding of the responses of large populations of neurons. However, when dealing with large-scale neural activity, interpretation becomes difficult, and comparisons between two animals, or across…

Neurons and Cognition · Quantitative Biology 2022-05-18 Max Dabagia , Konrad P Kording , Eva L Dyer

Designing effective rehabilitation strategies for upper extremities, particularly hands and fingers, warrants the need for a computational model of human motor learning. The presence of large degrees of freedom (DoFs) available in these…

Systems and Control · Electrical Eng. & Systems 2022-09-13 Ankur Kamboj , Rajiv Ranganathan , Xiaobo Tan , Vaibhav Srivastava

Cortical surface registration is often driven by local geometric descriptors (e.g., sulcal depth and curvature). While this approach achieves geometric correspondence, it neglects the long-range wiring constraints imposed by white-matter…

Computer Vision and Pattern Recognition · Computer Science 2026-05-19 Yang Xiang , Martin Cole , Zhengwu Zhang

Hilbert space structure is assumed as a valid geometric description for neurodynamics, i.e., for applying any kind of quantum formalism in brain dynamics. The orientation selectivity of the neurons is used as a justification to construct a…

Quantum Physics · Physics 2007-05-23 Sisir Roy , Menas Kafatos

Semantic segmentation is an established while rapidly evolving field in medical imaging. In this paper we focus on the segmentation of brain Magnetic Resonance Images (MRI) into cerebral structures using convolutional neural networks (CNN).…

Computer Vision and Pattern Recognition · Computer Science 2018-04-13 Pierre-Antoine Ganaye , Michaël Sdika , Hugues Benoit-Cattin

Humans and animals excel in combining information from multiple sensory modalities, controlling their complex bodies, adapting to growth, failures, or using tools. These capabilities are also highly desirable in robots. They are displayed…

Robotics · Computer Science 2022-11-08 Matej Hoffmann

Recent advances in material technology and in micro- and nano-electronics have profoundly changed the design of intracranial electrophysiology electrodes. It is now possible to manufacture electrodes that record cortical activity at a…

Neurons and Cognition · Quantitative Biology 2024-02-06 Pierre Bourdillon , Linnea Evanson

Understanding the cortical organization of the human brain requires interpretable descriptors for distinct structural and functional imaging data. 3D polarized light imaging (3D-PLI) is an imaging modality for visualizing fiber architecture…

Computer Vision and Pattern Recognition · Computer Science 2024-09-04 Alexander Oberstrass , Jordan DeKraker , Nicola Palomero-Gallagher , Sascha E. A. Muenzing , Alan C. Evans , Markus Axer , Katrin Amunts , Timo Dickscheid

Decoding visual representations from brain signals has attracted significant attention in both neuroscience and artificial intelligence. However, the degree to which brain signals truly encode visual information remains unclear. Current…

Computer Vision and Pattern Recognition · Computer Science 2026-02-10 Jiawen Zheng , Haonan Jia , Ming Li , Yuhui Zheng , Yufeng Zeng , Yang Gao , Chen Liang

Riemannian geometry has been applied to Brain Computer Interface (BCI) for brain signals classification yielding promising results. Studying electroencephalographic (EEG) signals from their associated covariance matrices allows a mitigation…

Machine Learning · Computer Science 2021-02-11 Emmanuel K. Kalunga , Sylvain Chevallier , Quentin Barthelemy

The reconstruction of cortical surfaces from brain magnetic resonance imaging (MRI) scans is essential for quantitative analyses of cortical thickness and sulcal morphology. Although traditional and deep learning-based algorithmic pipelines…

Computer Vision and Pattern Recognition · Computer Science 2022-03-21 Fabian Bongratz , Anne-Marie Rickmann , Sebastian Pölsterl , Christian Wachinger

In this paper we establish a generally and globally valid coordinate system in curved space-time with the simultaneous hypersurface orthogonal to the time coordinate. The time coordinate can be preseted according to practical evolving…

General Relativity and Quantum Cosmology · Physics 2017-12-27 Ying-Qiu Gu

Inter-subject registration of cortical areas is necessary in functional imaging (fMRI) studies for making inferences about equivalent brain function across a population. However, many high-level visual brain areas are defined as peaks of…

Neurons and Cognition · Quantitative Biology 2016-06-09 Marius Cătălin Iordan , Armand Joulin , Diane M. Beck , Li Fei-Fei

The neural networks of the human brain act as very efficient parallel processing computers co-ordinating memory related responses to a multitude of input signals from sensory organs. Information storage, update and appropriate retrieval are…

chao-dyn · Physics 2015-06-24 A. M. Selvam

Accurate registration of brain MRI scans is fundamental for cross-subject analysis in neuroscientific studies. This involves aligning both the cortical surface of the brain and the interior volume. Traditional methods treat volumetric and…

Computer Vision and Pattern Recognition · Computer Science 2025-12-24 S. Mazdak Abulnaga , Andrew Hoopes , Malte Hoffmann , Robin Magnet , Maks Ovsjanikov , Lilla Zöllei , John Guttag , Bruce Fischl , Adrian Dalca

Multimodal image alignment involves finding spatial correspondences between volumes varying in appearance and structure. Automated alignment methods are often based on local optimization that can be highly sensitive to their initialization.…

Image and Video Processing · Electrical Eng. & Systems 2024-10-28 Johan Öfverstedt , Joakim Lindblad , Nataša Sladoje

Linear models are widely used in computational neuroimaging to identify biomarkers associated with brain pathologies. However, interpreting the learned weights remains challenging, as they do not always yield clinically meaningful insights.…

Machine Learning · Computer Science 2026-04-23 Sara Petiton , Antoine Grigis , Raphaël Vock , Edouard Duchesnay

Dynamical system models such as Recurrent Neural Networks (RNNs) have become increasingly popular as hypothesis-generating tools in scientific research. Evaluating the dynamics in such networks is key to understanding their learned…

Machine Learning · Computer Science 2024-02-16 Ruiqi Chen , Giacomo Vedovati , Todd Braver , ShiNung Ching

The cerebral arteries are difficult to reproduce from first principles, featuring interwoven territories, and intricate layers of grey and white matter with differing metabolic demand. The aim of this study was to identify the ideal…

Medical Physics · Physics 2019-07-24 Jonathan Keelan , Emma M. L. Chung , James P. Hague

The analysis of manifold-valued data requires efficient tools from Riemannian geometry to cope with the computational complexity at stake. This complexity arises from the always-increasing dimension of the data, and the absence of…

Computer Vision and Pattern Recognition · Computer Science 2017-11-27 Maxime Louis , Alexandre Bône , Benjamin Charlier , Stanley Durrleman