Related papers: Relative persistent homology
The \v{C}ech complex is one of the most widely used tools in applied algebraic topology. Unfortunately, due to the inclusive nature of the \v{C}ech filtration, the number of simplices grows exponentially in the number of input points. A…
In this paper we define, implement, and investigate a simplicial complex construction for computing persistent homology of Euclidean point cloud data, which we call the Delaunay-Rips complex (DR). Assigning the Vietoris-Rips weights to…
Persistent homology is a popular computational tool for analyzing the topology of point clouds, such as the presence of loops or voids. However, many real-world datasets with low intrinsic dimensionality reside in an ambient space of much…
A central problem in data-driven scientific inquiry is how to interpret structure in noisy, high-dimensional data. Topological data analysis (TDA) provides a solution via persistent homology, which encodes features of interest as…
In this work, we explore links between natural homology and persistent homology for the classification of directed spaces. The former is an algebraic invariant of directed spaces, a semantic model of concurrent programs. The latter was…
Computing Persistent Homology for large point clouds remains a bottleneck for the wider adoption of persistent homology by the scientific community. We present an algorithm which can compute the degree-1 Vietoris-Rips Persistent Homology of…
The homology of an unknown subspace of Euclidean space can be determined from the intrinsic \v{C}ech complex of a sample of points in the subspace, without reference to the ambient Euclidean space. More precisely, given a subspace $X$ of…
The alpha complex is a subset of the Delaunay triangulation and is often used in computational geometry and topology. One of the main drawbacks of using the alpha complex is that it is non-monotone, in the sense that if ${\cal…
The aim of this paper is to present a method for computation of persistent homology that performs well at large filtration values. To this end we introduce the concept of filtered covers. We show that the persistent homology of a bounded…
Computing persistent homology using Gaussian kernels is useful in the domains of topological data analysis and machine learning as shown by Phillips, Wang and Zheng [SoCG 2015]. However, contrary to the case of computing persistent homology…
Motivated by applications in the medical sciences, we study finite chromatic sets in Euclidean space from a topological perspective. Based on the persistent homology for images, kernels and cokernels, we design provably stable homological…
Persistent homology is a popular and powerful tool for capturing topological features of data. Advances in algorithms for computing persistent homology have reduced the computation time drastically -- as long as the algorithm does not…
Recently, multi-scale notions of local homology (a variant of persistent homology) have been used to study the local structure of spaces around a given point from a point cloud sample. Current reconstruction guarantees rely on constructing…
Persistent homology, a powerful mathematical tool for data analysis, summarizes the shape of data through tracking topological features across changes in different scales. Classical algorithms for persistent homology are often constrained…
Persistent homology is a multiscale method for analyzing the shape of sets and functions from point cloud data arising from an unknown distribution supported on those sets. When the size of the sample is large, direct computation of the…
Persistent Homology (PH) offers stable, multi-scale descriptors of intrinsic shape structure by capturing connected components, loops, and voids that persist across scales, providing invariants that complement purely geometric…
We introduce a new algorithm to parallelise the computation of persistent homology of 2D alpha complexes. Our algorithm distributes the input point cloud among the cores which then compute a cover based on a rectilinear grid. We show how to…
Persistent homology is an important methodology in topological data analysis which adapts theory from algebraic topology to data settings. Computing persistent homology produces persistence diagrams, which have been successfully used in…
Persistent homology provides a robust methodology to infer topological structures from point cloud data. Here we explore the persistent homology of point clouds embedded into a probabilistic setting, exploiting the theory of point…
0-dimensional persistent homology is known, from a computational point of view, as the easy case. Indeed, given a list of $n$ edges in non-decreasing order of filtration value, one only needs a union-find data structure to keep track of the…