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Many Galactic globular clusters (GCs) originated in diverse host galaxies before being subsequently incorporated into the Milky Way through hierarchical galaxy assembly. Identifying their origins is crucial for revealing galaxy properties…

Genetic data are often used to infer demographic history and changes or detect genes under selection. Inferential methods are commonly based on models making various strong assumptions: demography and population structures are supposed…

Populations and Evolution · Quantitative Biology 2020-07-28 Clotilde Lepers , Sylvain Billiard , Matthieu Porte , Sylvie Méléard , Viet Chi Tran

Poaching poses significant threats to wildlife and biodiversity. A valuable step in reducing poaching is to forecast poacher behavior, which can inform patrol planning and other conservation interventions. Existing poaching prediction…

Machine Learning · Computer Science 2025-08-29 Lingkai Kong , Haichuan Wang , Charles A. Emogor , Vincent Börsch-Supan , Lily Xu , Milind Tambe

INTRODUCTION: Alzheimer's disease (AD) is genetically complex, complicating robust classification from genomic data. METHODS: We developed a transformer-based ensemble model (TrUE-Net) using Monte Carlo Dropout for uncertainty estimation in…

Genomics · Quantitative Biology 2025-06-03 Taeho Jo , Eun Hye Lee , Alzheimer's Disease Sequencing Project

Evolutionary forces shape patterns of genetic diversity within populations and contribute to phenotypic variation. In particular, recurrent positive selection has attracted significant interest in both theoretical and empirical studies.…

Populations and Evolution · Quantitative Biology 2014-05-09 Lawrence H. Uricchio , Ryan D. Hernandez

This study builds on person perception and human AI interaction (HAII) theories to investigate how content and source cues, specifically race, ethnicity, and nationality, affect judgments of AI-generated content in a high-stakes…

Artificial Intelligence · Computer Science 2024-12-30 Haoran Chu , Linjuan Rita Men , Sixiao Liu , Shupei Yuan , Yuan Sun

We investigate the competing effects and relative importance of intrinsic demographic and environmental variability on the evolutionary dynamics of a stochastic two-species Lotka-Volterra model by means of Monte Carlo simulations on a…

Populations and Evolution · Quantitative Biology 2013-01-28 Ulrich Dobramysl , Uwe C. Tauber

Here we present an Italian criminal case that shows how statistical methods can be used to extract information from a series of mixed DNA profiles. The case involves several different individuals and a set of different DNA traces. The case…

Applications · Statistics 2019-08-30 Francesco Dotto , Julia Mortera , Laura Baldasarri , Vincenzo Pascali

Asteroids and comets are of strategic importance for science in an effort to understand the formation, evolution and composition of the Solar System. Near-Earth Objects (NEOs) are of particular interest because of their accessibility from…

Dynamical Systems · Mathematics 2013-08-09 D. García Yárnoz , J. P. Sánchez , C. R. McInnes

The prediction of phenotypic traits using high-density genomic data has many applications such as the selection of plants and animals of commercial interest; and it is expected to play an increasing role in medical diagnostics. Statistical…

Methodology · Statistics 2016-09-29 Marco Scutari , Ian Mackay , David Balding

In fishery science, harvest management of size-structured stochastic populations is a long-standing and difficult problem. Rectilinear precautionary policies based on biomass and harvesting reference points have now become a standard…

Populations and Evolution · Quantitative Biology 2025-08-15 Felipe Montealegre-Mora , Carl Boettiger , Carl J. Walters , Christopher L. Cahill

In this paper we present the simplest individual level model of predator-prey dynamics and show, via direct calculation, that it exhibits cycling behavior. The deterministic analogue of our model, recovered when the number of individuals is…

Populations and Evolution · Quantitative Biology 2009-11-11 A. J. McKane , T. J. Newman

Orca (Orcinus orca) is known for complex vocalisation. Their social structure consists of pods and clans sharing unique dialects due to geographic isolation. Sound type repertoires are fundamental for monitoring orca populations and are…

Quantitative Methods · Quantitative Biology 2021-11-04 Stefano Palmero , Carlo Guidi , Vladimir Kulikovskiy , Matteo Sanguineti , Michele Manghi , Matteo Sommer , Gaia Pesce

State-of-the-art animal classification models like SpeciesNet provide predictions across thousands of species but use conservative rollup strategies, resulting in many animals labeled at high taxonomic levels rather than species. We present…

Computer Vision and Pattern Recognition · Computer Science 2025-10-17 Hugo Markoff , Jevgenijs Galaktionovs

Improved monitoring and associated inferential tools to efficiently identify declining bird populations, particularly of rare or sparsely distributed species, is key to informed conservation and management across large spatio-temporal…

Populations and Evolution · Quantitative Biology 2021-09-07 Jeffrey W. Doser , Aaron S. Weed , Elise F. Zipkin , Kathryn M. Miller , Andrew O. Finley

Fish harvesting often targets larger individuals, which can be sex-specific due to size dimorphism or differences in behaviors like migration and spawning. Sex-selective harvesting can have dire consequences in the long run, potentially…

Populations and Evolution · Quantitative Biology 2024-01-30 Joydeb Bhattacharyya , Arnab Chattopadhyay , Anurag Sau , Sabyasachi Bhattacharya

To characterize natural selection, various analytical methods for detecting candidate genomic regions have been developed. We propose to perform genome-wide scans of natural selection using principal component analysis. We show that the…

Populations and Evolution · Quantitative Biology 2015-11-19 Nicolas Duforet-Frebourg , Keurcien Luu , Guillaume Laval , Eric Bazin , Michael G. B. Blum

Plasmodium vivax populations are more resistant to malaria control strategies than Plasmodium falciparum, maintaining high genetic diversity and gene flow even at low transmission. To quantify the impact of declining transmission on P.…

Estimates of population abundance are fundamental to wildlife management and conservation, but are difficult to obtain across large geographic scales and for cryptic species. We used a state-space model with age-at-harvest data in a…

Populations and Evolution · Quantitative Biology 2019-05-23 Maximilian L. Allen , Nathan M. Roberts , Andrew S. Norton , Timothy R. Van Deelen

We propose a genetic algorithm (GA) for hyperparameter optimization of artificial neural networks which includes chromosomal crossover as well as a decoupling of parameters (i.e., weights and biases) from hyperparameters (e.g., learning…

Neural and Evolutionary Computing · Computer Science 2019-01-15 Aaron Vose , Jacob Balma , Alex Heye , Alessandro Rigazzi , Charles Siegel , Diana Moise , Benjamin Robbins , Rangan Sukumar