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Modern computational organic chemistry is becoming increasingly data-driven. There remain a large number of important unsolved problems in this area such as product prediction given reactants, drug discovery, and metric-optimized molecule…

Biomolecules · Quantitative Biology 2026-02-10 Josh Payne , Mario Srouji , Dian Ang Yap , Vineet Kosaraju

This study compares the effectiveness and robustness of multi-class categorization of Amazon product data using transfer learning on pre-trained contextualized language models. Specifically, we fine-tuned BERT and XLNet, two bidirectional…

Machine Learning · Statistics 2019-09-24 Xinyi Liu , Artit Wangperawong

BERT-based text ranking models have dramatically advanced the state-of-the-art in ad-hoc retrieval, wherein most models tend to consider individual query-document pairs independently. In the mean time, the importance and usefulness to…

Information Retrieval · Computer Science 2021-04-20 Xiaoyang Chen , Kai Hui , Ben He , Xianpei Han , Le Sun , Zheng Ye

Deep autoregressive sequence-to-sequence models have demonstrated impressive performance across a wide variety of tasks in recent years. While common architecture classes such as recurrent, convolutional, and self-attention networks make…

Machine Learning · Computer Science 2018-11-09 Mitchell Stern , Noam Shazeer , Jakob Uszkoreit

Discrete diffusion language models have shown strong potential for text generation, yet standard supervised fine-tuning (SFT) misaligns with their semi-autoregressive inference: training randomly masks tokens across the entire response,…

Computation and Language · Computer Science 2025-10-24 Bowen Sun , Yujun Cai , Ming-Hsuan Yang , Yiwei Wang

As large language models scale to longer contexts, loading the growing KV cache during attention computation becomes a critical bottleneck. Previous work has shown that attention computation is dominated by a small subset of tokens. This…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-13 Di Liu , Ruitian Wang , Chen Chen , Mingliang Gong , Yongjie Yuan , Han Zhao , Yu Feng , Quan Chen , Minyi Guo

Limited computational budgets often prevent transformers from being used in production and from having their high accuracy utilized. TinyBERT addresses the computational efficiency by self-distilling BERT into a smaller transformer…

Computation and Language · Computer Science 2021-11-19 Shira Guskin , Moshe Wasserblat , Ke Ding , Gyuwan Kim

This paper introduces a novel approach to enhance the capabilities of Large Language Models (LLMs) in processing and understanding extensive text sequences, a critical aspect in applications requiring deep comprehension and synthesis of…

Computation and Language · Computer Science 2023-12-15 Kaiqiang Song , Xiaoyang Wang , Sangwoo Cho , Xiaoman Pan , Dong Yu

We present MetricBERT, a BERT-based model that learns to embed text under a well-defined similarity metric while simultaneously adhering to the ``traditional'' masked-language task. We focus on downstream tasks of learning similarities for…

Computation and Language · Computer Science 2022-08-16 Itzik Malkiel , Dvir Ginzburg , Oren Barkan , Avi Caciularu , Yoni Weill , Noam Koenigstein

Probing complex language models has recently revealed several insights into linguistic and semantic patterns found in the learned representations. In this paper, we probe BERT specifically to understand and measure the relational knowledge…

Computation and Language · Computer Science 2021-09-09 Jonas Wallat , Jaspreet Singh , Avishek Anand

Efficient inference is critical for long-context language models, where attention computation and KV-cache access dominate the cost. Recent work RAT+, introduces a recurrence-augmented attention backbone that enables flexible dilated…

Machine Learning · Computer Science 2026-05-28 Xiuying Wei , Caglar Gulcehre

In this paper, we introduce the prior knowledge, multi-scale structure, into self-attention modules. We propose a Multi-Scale Transformer which uses multi-scale multi-head self-attention to capture features from different scales. Based on…

Computation and Language · Computer Science 2019-12-03 Qipeng Guo , Xipeng Qiu , Pengfei Liu , Xiangyang Xue , Zheng Zhang

SplaXBERT, built on ALBERT-xlarge with context-splitting and mixed precision training, achieves high efficiency in question-answering tasks on lengthy texts. Tested on SQuAD v1.1, it attains an Exact Match of 85.95% and an F1 Score of…

Computation and Language · Computer Science 2024-12-10 Zhu Yufan , Hao Zeyu , Li Siqi , Niu Boqian

Self-attention based Transformer has demonstrated the state-of-the-art performances in a number of natural language processing tasks. Self-attention is able to model long-term dependencies, but it may suffer from the extraction of…

Computation and Language · Computer Science 2019-12-30 Guangxiang Zhao , Junyang Lin , Zhiyuan Zhang , Xuancheng Ren , Qi Su , Xu Sun

We present SpanBERT, a pre-training method that is designed to better represent and predict spans of text. Our approach extends BERT by (1) masking contiguous random spans, rather than random tokens, and (2) training the span boundary…

Computation and Language · Computer Science 2020-01-22 Mandar Joshi , Danqi Chen , Yinhan Liu , Daniel S. Weld , Luke Zettlemoyer , Omer Levy

Heavily overparameterized language models such as BERT, XLNet and T5 have achieved impressive success in many NLP tasks. However, their high model complexity requires enormous computation resources and extremely long training time for both…

Computation and Language · Computer Science 2021-06-09 Xiaohan Chen , Yu Cheng , Shuohang Wang , Zhe Gan , Zhangyang Wang , Jingjing Liu

Detecting plagiarism involves finding similar items in two different sources. In this article, we propose a novel method for detecting plagiarism that is based on attention mechanism-based long short-term memory (LSTM) and bidirectional…

Computation and Language · Computer Science 2023-05-05 Seyed Vahid Moravvej , Seyed Jalaleddin Mousavirad , Diego Oliva , Fardin Mohammadi

In this paper, we report our method for the Information Extraction task in 2019 Language and Intelligence Challenge. We incorporate BERT into the multi-head selection framework for joint entity-relation extraction. This model extends…

Computation and Language · Computer Science 2019-09-27 Weipeng Huang , Xingyi Cheng , Taifeng Wang , Wei Chu

With the popularity of the recent Transformer-based models represented by BERT, GPT-3 and ChatGPT, there has been state-of-the-art performance in a range of natural language processing tasks. However, the massive computations, huge memory…

Computation and Language · Computer Science 2023-04-04 Gaochen Dong , Wei Chen

Time series analysis is crucial in diverse scenarios. Beyond forecasting, considerable real-world tasks are categorized into classification, imputation, and anomaly detection, underscoring different capabilities termed time series…

Machine Learning · Computer Science 2025-03-03 Haoran Zhang , Yong Liu , Yunzhong Qiu , Haixuan Liu , Zhongyi Pei , Jianmin Wang , Mingsheng Long