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Deep learning has become a powerful tool in computational biology, revolutionising the analysis and interpretation of biological data over time. In our article review, we delve into various aspects of deep learning in computational biology.…

With the advancements in computer technology, there is a rapid development of intelligent systems to understand the complex relationships in data to make predictions and classifications. Artificail Intelligence based framework is rapidly…

Machine Learning · Computer Science 2021-07-30 G Jignesh Chowdary , Suganya G , Premalatha M , Asnath Victy Phamila Y , Karunamurthy K

Protein structure-based property prediction has emerged as a promising approach for various biological tasks, such as protein function prediction and sub-cellular location estimation. The existing methods highly rely on experimental protein…

Machine Learning · Computer Science 2023-10-20 Yufei Huang , Siyuan Li , Jin Su , Lirong Wu , Odin Zhang , Haitao Lin , Jingqi Qi , Zihan Liu , Zhangyang Gao , Yuyang Liu , Jiangbin Zheng , Stan. ZQ. Li

Fingerprint recognition is one of most popular and accuracy Biometric technologies. Nowadays, it is used in many real applications. However, recognizing fingerprints in poor quality images is still a very complex problem. In recent years,…

Computer Vision and Pattern Recognition · Computer Science 2011-07-19 Le Hoang Thai , Ha Nhat Tam

Over the past few years, we have seen fundamental breakthroughs in core problems in machine learning, largely driven by advances in deep neural networks. At the same time, the amount of data collected in a wide array of scientific domains…

Machine Learning · Computer Science 2020-03-27 Maithra Raghu , Eric Schmidt

Structure-based drug design (SBDD), which aims to generate 3D ligand molecules binding to target proteins, is a fundamental task in drug discovery. Existing SBDD methods typically treat protein as rigid and neglect protein structural change…

Biomolecules · Quantitative Biology 2024-10-01 Zaixi Zhang , Mengdi Wang , Qi Liu

Model fingerprinting has emerged as a powerful tool for model owners to identify their shared model given API access. However, to lower false discovery rate, fight fingerprint leakage, and defend against coalitions of model users attempting…

Cryptography and Security · Computer Science 2025-10-01 Anshul Nasery , Jonathan Hayase , Creston Brooks , Peiyao Sheng , Himanshu Tyagi , Pramod Viswanath , Sewoong Oh

Skin cancer is one of the most threatening diseases worldwide. However, diagnosing skin cancer correctly is challenging. Recently, deep learning algorithms have emerged to achieve excellent performance on various tasks. Particularly, they…

Image and Video Processing · Electrical Eng. & Systems 2020-12-08 Hongfeng Li , Yini Pan , Jie Zhao , Li Zhang

Recently, by using deep neural network based algorithms, object classification, detection and semantic segmentation solutions are significantly improved. However, one challenge for 2D image-based systems is that they cannot provide accurate…

Computer Vision and Pattern Recognition · Computer Science 2022-01-25 Xiaoke Shen

As computers get faster, researchers -- not hardware or algorithms -- become the bottleneck in scientific discovery. Computational study of colloidal self-assembly is one area that is keenly affected: even after computers generate massive…

Soft Condensed Matter · Physics 2018-03-28 Matthew Spellings , Sharon C Glotzer

Crime prediction is a widely studied research problem due to its importance in ensuring safety of city dwellers. Starting from statistical and classical machine learning based crime prediction methods, in recent years researchers have…

Machine Learning · Computer Science 2024-07-30 Rittik Basak Utsha , Muhtasim Noor Alif , Yeasir Rayhan , Tanzima Hashem , Mohammad Eunus Ali

Automatic extraction of chemical structures from scientific literature plays a crucial role in accelerating research across fields ranging from drug discovery to materials science. Patent documents, in particular, contain molecular…

Computer Vision and Pattern Recognition · Computer Science 2025-10-09 Lucas Morin , Gerhard Ingmar Meijer , Valéry Weber , Luc Van Gool , Peter W. J. Staar

In this paper, we review recent developments and the role of Graph Neural Networks (GNNs) in computational drug discovery, including molecule generation, molecular property prediction, and drug-drug interaction prediction. By summarizing…

Machine Learning · Computer Science 2025-06-03 Zhengyu Fang , Xiaoge Zhang , Anyin Zhao , Xiao Li , Huiyuan Chen , Jing Li

Identification of a person from fingerprints of good quality has been used by commercial applications and law enforcement agencies for many years, however identification of a person from latent fingerprints is very difficult and…

Computer Vision and Pattern Recognition · Computer Science 2019-07-31 Hamid Jan , Amjad Ali , Shahid Mahmood , Gautam Srivastava

Machine learning has huge potential to revolutionize the field of drug discovery and is attracting increasing attention in recent years. However, lacking domain knowledge (e.g., which tasks to work on), standard benchmarks and data…

Structure-based drug design involves finding ligand molecules that exhibit structural and chemical complementarity to protein pockets. Deep generative methods have shown promise in proposing novel molecules from scratch (de-novo design),…

Quantitative Methods · Quantitative Biology 2021-11-09 Pavol Drotár , Arian Rokkum Jamasb , Ben Day , Cătălina Cangea , Pietro Liò

Accurate prediction of protein-ligand binding affinities is crucial for drug development. Recent advances in machine learning show promising results on this task. However, these methods typically rely heavily on labeled data, which can be…

Machine Learning · Computer Science 2024-06-13 Meng Liu , Saee Gopal Paliwal

Face recognition is one of the most studied research topics in the community. In recent years, the research on face recognition has shifted to using 3D facial surfaces, as more discriminating features can be represented by the 3D geometric…

Computer Vision and Pattern Recognition · Computer Science 2021-08-26 Yaping Jing , Xuequan Lu , Shang Gao

Predicting the biological function of molecules, be it proteins or drug-like compounds, from their atomic structure is an important and long-standing problem. Function is dictated by structure, since it is by spatial interactions that…

Efficient indexing is fundamental for multi-dimensional data management and analytics. An emerging tendency is to directly learn the storage layout of multi-dimensional data by simple machine learning models, yielding the concept of Learned…

Databases · Computer Science 2024-05-10 Qiyu Liu , Maocheng Li , Yuxiang Zeng , Yanyan Shen , Lei Chen