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Quasicrystals are unique materials characterized by long-range order without periodicity. They are observed in systems such as metallic alloys, soft matter, and particle simulations. Unlike periodic crystals, which are invariant under…

Computational Physics · Physics 2024-11-14 Nydia Roxana Varela-Rosales , Michael Engel

The sluggish and heterogeneous dynamics of glass forming liquids is frequently associated to the transient coexistence of two phases of particles, respectively with an high and low mobility. In the absence of a dynamical order parameter…

Soft Condensed Matter · Physics 2016-07-21 Raffaele Pastore , Antonio Coniglio , Antonio de Candia , Annalisa Fierro , Massimo Pica Ciamarra

We study the relationship between local structural ordering and dynamical heterogeneities in a model glass-forming liquid, the Wahnstrom mixture. A novel cluster-based approach is used to detect local energy minimum polyhedral clusters and…

Soft Condensed Matter · Physics 2013-02-26 Alex Malins , Jens Eggers , C. Patrick Royall , Stephen R. Williams , Hajime Tanaka

We use a structure analysis technique that quantifies cluster geometries using machine learning to identify a bicapped square antiprism (BSAP) as the nearest-neighbor cluster involved in the glass transition in Pd82Si18, a prototype…

Materials Science · Physics 2019-01-23 Jason J. Maldonis , Paul M. Voyles

Recently low-temperature structural transition has been reported for complex cubic compounds Cd6M (M=Ca, Yb, Y, rare earth) and it is believed that the transition is due to orientational ordering of an atomic shell in the icosahedral…

Materials Science · Physics 2009-11-13 Kazuki Nozawa , Yasushi Ishii

Depletion interactions arise from entropic forces, and their ability to induce aggregation and even ordering of colloidal particles through self-assembly is well established, especially for spherical colloids. We vary the size and…

Soft Condensed Matter · Physics 2016-03-15 Andrew S. Karas , Jens Glaser , Sharon C. Glotzer

The assembly of colloidal cubic diamond is a challenging process since the shape and interaction parameters and the thermodynamic conditions where this structure is stable are elusive. The simultaneous use of shape-anisotropic particles and…

Soft Condensed Matter · Physics 2024-06-12 Susana Marín-Aguilar , Fabrizio Camerin , Marjolein Dijkstra

We study concentrated colloidal suspensions, a model system which has a glass transition. The non-equilibrium nature of the glassy state is most clearly highlighted by aging -- the dependence of the system's properties on the time elapsed…

Soft Condensed Matter · Physics 2007-05-23 Gianguido C. Cianci , Rachel E. Courtland , Eric R. Weeks

We propose a conservative algorithm to test the geometrical validity of simplicial (triangles, tetrahedra), tensor product (quadrilaterals, hexahedra), and mixed (prisms) elements of arbitrary polynomial order as they deform over a…

Computational Geometry · Computer Science 2025-07-10 Federico Sichetti , Zizhou Huang , Marco Attene , Denis Zorin , Enrico Puppo , Daniele Panozzo

A fundamental characteristic of matter is its ability to form ordered structures under the right thermodynamic conditions. Predicting these structures - and their properties - from the attributes of a material's building blocks is the holy…

Soft Condensed Matter · Physics 2012-02-13 Pablo F. Damasceno , Michael Engel , Sharon C. Glotzer

We consider the incidence structure formed by the twelve pentagons given by the vertex neighborhoods of the icosahedron. Interpreting this structure purely in terms of coplanarity conditions, we show that -- up to projective equivalence --…

Combinatorics · Mathematics 2026-03-23 Jürgen Richter-Gebert

The slow dynamics for a colloidal suspension of particles interacting with a hard-core repulsion complemented by a short-ranged attraction is discussed within the frame of mode-coupling theory for ideal glass transitions for parameter…

Soft Condensed Matter · Physics 2007-05-23 Matthias Sperl

We study the fine geometric structure of bifurcation currents in the parameter space of cubic polynomials viewed as dynamical systems. In particular we prove that these currents have some laminar structure in a large region of parameter…

Dynamical Systems · Mathematics 2007-05-23 Romain Dujardin

Crystals and other condensed phases are defined primarily by their inherent symmetries, which play a crucial role in dictating their structural properties. In crystallization studies, local order parameters (OPs) that describe bond…

Computational Physics · Physics 2026-04-10 Domagoj Fijan , Maria R. Ward Rashidi , Jenna Bradley , Sharon C. Glotzer

We report molecular dynamics calculations on two-component, cold (1.2 > T > 0.56 in natural units), three-dimensional Lennard-Jones fluids. Our system was small (7813 A, 7812 B particles), dense (N/V = 1.30), and distinctly finite (L \times…

Soft Condensed Matter · Physics 2009-11-11 Paul C. Whitford , George D. J. Phillies

We suggest and implement an approach for the bottom-up description of systems undergoing large-scale structural changes and chemical transformations from dynamic atomically resolved imaging data, where only partial or uncertain data on…

Materials Science · Physics 2021-04-23 Sergei V. Kalinin , Ondrej Dyck , Stephen Jesse , Maxim Ziatdinov

We investigate structural order in glassy water by performing classical molecular dynamics simulations using the extended simple point charge (SPC/E) model of water. We perform isochoric cooling simulations across the glass transition…

Soft Condensed Matter · Physics 2009-11-11 Nicolas Giovambattista , Pablo G. Debenedetti , Francesco Sciortino , H. Eugene Stanley

Disordered systems like liquids, gels, glasses, or granular materials are not only ubiquitous in daily life and in industrial applications but they are also crucial for the mechanical stability of cells or the transport of chemical and…

Disordered Systems and Neural Networks · Physics 2019-04-30 Zhen Zhang , Walter Kob

The ability to control forces between sub-micron-scale building blocks offers considerable potential for designing new materials through self-assembly. A typical paradigm is to first identify a particular (crystal) structure that has some…

Soft Condensed Matter · Physics 2024-04-24 Mengjie Zu , Carl Goodrich

We use molecular dynamics to study the ordering of a nematic liquid crystal around a spherical particle or droplet. Homeotropic boundary conditions and strong anchoring create a hedgehog director configuration on the particle surface and in…

Soft Condensed Matter · Physics 2013-03-19 D. Andrienko , G. Germano , M. P. Allen