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Retrieval-Augmented Generation (RAG) has significantly mitigated the hallucinations of Large Language Models (LLMs) by grounding the generation with external knowledge. Recent extensions of RAG to graph-based retrieval offer a promising…

Machine Learning · Computer Science 2025-09-23 Jialin Chen , Houyu Zhang , Seongjun Yun , Alejandro Mottini , Rex Ying , Xiang Song , Vassilis N. Ioannidis , Zheng Li , Qingjun Cui

A large number of deep learning models have been proposed for the text matching problem, which is at the core of various typical natural language processing (NLP) tasks. However, existing deep models are mainly designed for the semantic…

Computation and Language · Computer Science 2019-02-28 Ting Zhang , Bang Liu , Di Niu , Kunfeng Lai , Yu Xu

Retrieval Augmented Generation (RAG) frameworks improve the accuracy of large language models (LLMs) by integrating external knowledge from retrieved documents, thereby overcoming the limitations of models' static intrinsic knowledge.…

Information Retrieval · Computer Science 2025-09-19 Jingjie Zheng , Aryo Pradipta Gema , Giwon Hong , Xuanli He , Pasquale Minervini , Youcheng Sun , Qiongkai Xu

Recent advances in natural language processing (NLP) owe their success to pre-training language models on large amounts of unstructured data. Still, there is an increasing effort to combine the unstructured nature of LMs with structured…

Computation and Language · Computer Science 2023-12-22 Juraj Vladika , Alexander Fichtl , Florian Matthes

In this paper, we propose a Boundary-aware Graph Reasoning (BGR) module to learn long-range contextual features for semantic segmentation. Rather than directly construct the graph based on the backbone features, our BGR module explores a…

Computer Vision and Pattern Recognition · Computer Science 2021-08-10 Haoteng Tang , Haozhe Jia , Weidong Cai , Heng Huang , Yong Xia , Liang Zhan

Deep learning has achieved remarkable success in medical image analysis, however its adoption in clinical practice is limited by a lack of interpretability. These models often make correct predictions without explaining their reasoning.…

Image and Video Processing · Electrical Eng. & Systems 2025-10-03 Jhonatan Contreras , Thomas Bocklitz

Recent studies seek to provide Graph Neural Network (GNN) interpretability via multiple unsupervised learning models. Due to the scarcity of datasets, current methods easily suffer from learning bias. To solve this problem, we embed a Large…

Machine Learning · Computer Science 2024-07-24 Jiaxing Zhang , Jiayi Liu , Dongsheng Luo , Jennifer Neville , Hua Wei

Rapid advances in GPU hardware and multiple areas of Deep Learning open up a new opportunity for billion-scale information retrieval with exhaustive search. Building on top of the powerful concept of semantic learning, this paper proposes a…

Information Retrieval · Computer Science 2018-02-20 Ying Shan , Jian Jiao , Jie Zhu , JC Mao

Graph Neural Network (GNN) is an emerging technique for graph-based learning tasks such as node classification. In this work, we reveal the vulnerability of GNN to the imbalance of node labels. Traditional solutions for imbalanced…

Machine Learning · Computer Science 2022-02-08 Xiaohe Li , Lijie Wen , Yawen Deng , Fuli Feng , Xuming Hu , Lei Wang , Zide Fan

Evidence-based medicine (EBM) plays a crucial role in the application of large language models (LLMs) in healthcare, as it provides reliable support for medical decision-making processes. Although it benefits from current…

Computation and Language · Computer Science 2025-03-24 Chengfeng Dou , Ying Zhang , Zhi Jin , Wenpin Jiao , Haiyan Zhao , Yongqiang Zhao , Zhengwei Tao

Representation learning on graphs has emerged as a powerful mechanism to automate feature vector generation for downstream machine learning tasks. The advances in representation on graphs have centered on both homogeneous and heterogeneous…

Machine Learning · Statistics 2020-11-23 Piotr Bielak , Kamil Tagowski , Maciej Falkiewicz , Tomasz Kajdanowicz , Nitesh V. Chawla

Graph neural networks (GNNs) have become a powerful tool for processing graph-structured data but still face challenges in effectively aggregating and propagating information between layers, which limits their performance. We tackle this…

Machine Learning · Computer Science 2023-02-09 Maxim Fishman , Chaim Baskin , Evgenii Zheltonozhskii , Almog David , Ron Banner , Avi Mendelson

Graph Neural Networks (GNNs) have demonstrated significant success in learning from graph-structured data but often struggle on heterophilous graphs, where connected nodes differ in features or class labels. This limitation arises from…

Machine Learning · Computer Science 2025-09-30 Zhongtian Sun , Anoushka Harit , Alexandra Cristea , Christl A. Donnelly , Pietro Liò

How to properly model graphs is a long-existing and important problem in NLP area, where several popular types of graphs are knowledge graphs, semantic graphs and dependency graphs. Comparing with other data structures, such as sequences…

Computation and Language · Computer Science 2019-07-16 Linfeng Song

Retrieval-augmented generation (RAG) is a common way to ground language models in external documents and up-to-date information. Classical retrieval systems relied on lexical methods such as BM25, which rank documents by term overlap with…

Computation and Language · Computer Science 2026-03-05 Martin Asenov , Kenza Benkirane , Dan Goldwater , Aneiss Ghodsi

Query understanding plays a key role in exploring users' search intents and facilitating users to locate their most desired information. However, it is inherently challenging since it needs to capture semantic information from short and…

Information Retrieval · Computer Science 2023-11-20 Juanhui Li , Yao Ma , Wei Zeng , Suqi Cheng , Jiliang Tang , Shuaiqiang Wang , Dawei Yin

The rapid expansion of publicly-available medical data presents a challenge for clinicians and researchers alike, increasing the gap between the volume of scientific literature and its applications. The steady growth of studies and findings…

Artificial Intelligence · Computer Science 2025-08-06 Taine J. Elliott , Stephen P. Levitt , Ken Nixon , Martin Bekker

Textual Attributed Graphs (TAGs) are crucial for modeling complex real-world systems, yet leveraging large language models (LLMs) for TAGs presents unique challenges due to the gap between sequential text processing and graph-structured…

Machine Learning · Computer Science 2025-05-09 Zhengyu Hu , Yichuan Li , Zhengyu Chen , Jingang Wang , Han Liu , Kyumin Lee , Kaize Ding

Although rare diseases are characterized by low prevalence, approximately 300 million people are affected by a rare disease. The early and accurate diagnosis of these conditions is a major challenge for general practitioners, who do not…

Computation and Language · Computer Science 2021-11-12 Isabel Segura-Bedmar , David Camino-Perdonas , Sara Guerrero-Aspizua

Two-dimensional nanomaterials, such as graphene, have been extensively studied because of their outstanding physical properties. Structure and geometry optimization of nanopores on such materials is beneficial for their performances in…

Machine Learning · Computer Science 2022-01-19 Yuyang Wang , Zhonglin Cao , Amir Barati Farimani