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The search for the optimal pair of active and protection paths in a network with Shared Risk Link Groups (SRLG) is a challenging but high-value problem in the industry that is inevitable in ensuring reliable connections on the modern…

Data Structures and Algorithms · Computer Science 2025-08-05 P. A. Mosharev , Choon-Meng Lee , Xu Shu , Xiaoshan Zhang , Man-Hong Yung

Given a graph $G = (V,E)$ and a subset $T \subseteq V$ of terminals, a \emph{Steiner tree} of $G$ is a tree that spans $T$. In the vertex-weighted Steiner tree (VST) problem, each vertex is assigned a non-negative weight, and the goal is to…

Data Structures and Algorithms · Computer Science 2019-05-07 Faryad Darabi Sahneh , Alon Efrat , Stephen Kobourov , Spencer Krieger , Richard Spence

Distributed graph algorithms that separately optimize for either the number of rounds used or the total number of messages sent have been studied extensively. However, algorithms simultaneously efficient with respect to both measures have…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-05-18 Bernhard Haeupler , D. Ellis Hershkowitz , David Wajc

Hierarchical clustering is a popular method for identifying distinct groups in a dataset. The most commonly used method for pruning a dendrogram is via a single horizontal cut. In this paper, we propose a new technique "weakest link optimal…

Methodology · Statistics 2023-01-20 Jiacheng Ge , Robert Tibshirani

Motivated by applications in clustering and synthetic data generation, we consider the problem of releasing a minimum spanning tree (MST) under edge-weight differential privacy constraints where a graph topology $G=(V,E)$ with $n$ vertices…

Data Structures and Algorithms · Computer Science 2024-08-14 Rasmus Pagh , Lukas Retschmeier

Most of the existing clustering methods are based on a single granularity of information, such as the distance and density of each data. This most fine-grained based approach is usually inefficient and susceptible to noise. Therefore, we…

Machine Learning · Computer Science 2023-03-30 Jiang Xie , Shuyin Xia , Guoyin Wang , Xinbo Gao

Tensor networks have proven to be a valuable tool, for instance, in the classical simulation of (strongly correlated) quantum systems. As the size of the systems increases, contracting larger tensor networks becomes computationally…

Quantum Physics · Physics 2025-07-29 Manuel Geiger , Qunsheng Huang , Christian B. Mendl

We develop a time-optimal $O(mn^2)$-time algorithm to construct the subtree prune-regraft (SPR) graph on a collection of m phylogenetic trees with n leaves. This improves on the previous bound of $O(mn^3)$. Such graphs are used to better…

Data Structures and Algorithms · Computer Science 2017-04-28 Chris Whidden , Frederick A. Matsen

Many discrete optimization problems amount to selecting a feasible set of edges of least weight. We consider in this paper the context of spatial graphs where the positions of the vertices are uncertain and belong to known uncertainty sets.…

Data Structures and Algorithms · Computer Science 2022-09-27 Marin Bougeret , Jérémy Omer , Michael Poss

A module of a graph G is a set of vertices that have the same set of neighbours outside. Modules of a graphs form a so-called partitive family and thereby can be represented by a unique tree MD(G), called the modular decomposition tree.…

Discrete Mathematics · Computer Science 2024-07-15 Derek Corneil , Michel Habib , Christophe Paul , Marc Tedder

The Large Margin Distribution Machine (LMDM) is a recent advancement in classifier design that optimizes not just the minimum margin (as in SVM) but the entire margin distribution, thereby improving generalization. However, existing LMDM…

Machine Learning · Computer Science 2025-09-19 Yang Xu , Junpeng Li , Changchun Hua , Yana Yang

Recent years have witnessed a surge of biological interest in the minimum spanning tree (MST) problem for its relevance to automatic model construction using the distances between data points. Despite the increasing use of MST algorithms…

Quantitative Methods · Quantitative Biology 2015-11-02 Momoko Hayamizu , Hiroshi Endo , Kenji Fukumizu

An algorithm is proposed for constructing directed spanning forests of the minimum weight, in which the maximum possible degree of affinity between the minimum forests is preserved when the number of trees changes. The correctness of the…

Combinatorics · Mathematics 2025-02-18 Vasily Buslov

The slice-wise multiplication of two tensors is required in a variety of tensor decompositions (including PARAFAC2 and PARATUCK2) and is encountered in many applications, including the analysis of multidimensional biomedical data (EEG, MEG,…

Signal Processing · Electrical Eng. & Systems 2020-01-22 Kristina Naskovska , André L. F. de Almeida , Martin Haardt

We introduce a graph partitioning problem motivated by computational topology and propose two algorithms that produce approximate solutions. Specifically, given a weighted, undirected graph $G$ and a positive integer $k$, we desire to find…

Combinatorics · Mathematics 2019-07-04 Abdel-Rahman Madkour , Phillip Nadolny , Matthew Wright

Recursive partitioning is the core of several statistical methods including CART, random forest, and boosted trees. Despite the popularity of tree based methods, to date, there did not exist methods for combining multiple trees into a…

Data Structures and Algorithms · Computer Science 2016-03-18 Sean Skwerer , Heping Zhang

We study the problem of finding a minimum weight connected subgraph spanning at least $k$ vertices on planar, node-weighted graphs. We give a $(4+\eps)$-approximation algorithm for this problem. We achieve this by utilizing the recent LMP…

Data Structures and Algorithms · Computer Science 2018-05-09 Jarosław Byrka , Mateusz Lewandowski , Joachim Spoerhase

In this paper we describe an algorithm that embeds a graph metric $(V,d_G)$ on an undirected weighted graph $G=(V,E)$ into a distribution of tree metrics $(T,D_T)$ such that for every pair $u,v\in V$, $d_G(u,v)\leq d_T(u,v)$ and…

Data Structures and Algorithms · Computer Science 2017-05-29 Guy E. Blelloch , Yan Gu , Yihan Sun

We present a tree-tensor-network-based method to study strongly correlated systems with nonlocal interactions in higher dimensions. Although the momentum-space and quantum-chemistry versions of the density matrix renormalization group…

Strongly Correlated Electrons · Physics 2010-11-08 Valentin Murg , Örs Legeza , Reinhard M. Noack , Frank Verstraete

Many important applications across science, data analytics, and AI workloads depend on distributed matrix multiplication. Prior work has developed a large array of algorithms suitable for different problem sizes and partitionings including…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-13 Benjamin Brock , Renato Golin