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Abbreviations are unavoidable yet critical parts of the medical text. Using abbreviations, especially in clinical patient notes, can save time and space, protect sensitive information, and help avoid repetitions. However, most abbreviations…

Computation and Language · Computer Science 2022-10-07 Mucahit Cevik , Sanaz Mohammad Jafari , Mitchell Myers , Savas Yildirim

Abbreviation disambiguation is important for automated clinical note processing due to the frequent use of abbreviations in clinical settings. Current models for automated abbreviation disambiguation are restricted by the scarcity and…

Machine Learning · Computer Science 2019-12-16 Marta Skreta , Aryan Arbabi , Jixuan Wang , Michael Brudno

Topic models have been successfully used for analyzing text documents. However, with existing topic models, many documents are required for training. In this paper, we propose a neural network-based few-shot learning method that can learn a…

Computation and Language · Computer Science 2021-04-20 Tomoharu Iwata

In recent years, the trend of deploying digital systems in numerous industries has hiked. The health sector has observed an extensive adoption of digital systems and services that generate significant medical records. Electronic health…

Computation and Language · Computer Science 2022-03-01 Neel Kanwal , Giuseppe Rizzo

Pretrained language models have improved zero-shot text classification by allowing the transfer of semantic knowledge from the training data in order to classify among specific label sets in downstream tasks. We propose a simple way to…

Computation and Language · Computer Science 2023-10-24 Lingyu Gao , Debanjan Ghosh , Kevin Gimpel

Intensive Care in-hospital mortality prediction has various clinical applications. Neural prediction models, especially when capitalising on clinical notes, have been put forward as improvement on currently existing models. However, to be…

Computation and Language · Computer Science 2022-12-14 Miguel Rios , Ameen Abu-Hanna

While pre-trained language models have obtained state-of-the-art performance for several natural language understanding tasks, they are quite opaque in terms of their decision-making process. While some recent works focus on rationalizing…

Computation and Language · Computer Science 2021-09-20 Meghana Moorthy Bhat , Alessandro Sordoni , Subhabrata Mukherjee

The success of deep learning methods hinges on the availability of large training datasets annotated for the task of interest. In contrast to human intelligence, these methods lack versatility and struggle to learn and adapt quickly to new…

Computation and Language · Computer Science 2020-10-13 Nithin Holla , Pushkar Mishra , Helen Yannakoudakis , Ekaterina Shutova

Deep neural network models have recently achieved state-of-the-art performance gains in a variety of natural language processing (NLP) tasks (Young, Hazarika, Poria, & Cambria, 2017). However, these gains rely on the availability of large…

Computation and Language · Computer Science 2018-11-15 Maximilian Hofer , Andrey Kormilitzin , Paul Goldberg , Alejo Nevado-Holgado

Few-shot methods for accurate modeling under sparse label-settings have improved significantly. However, the applications of few-shot modeling in natural language processing remain solely in the field of document classification. With recent…

Computation and Language · Computer Science 2022-12-20 Anton Thielmann , Christoph Weisser , Benjamin Säfken

Pre-trained vision-language models learn massive data to model unified representations of images and natural languages, which can be widely applied to downstream machine learning tasks. In addition to zero-shot inference, in order to better…

Computer Vision and Pattern Recognition · Computer Science 2024-06-28 Qian-Wei Wang , Yuqiu Xie , Letian Zhang , Zimo Liu , Shu-Tao Xia

Clinical notes in electronic health records contain highly heterogeneous writing styles, including non-standard terminology or abbreviations. Using these notes in predictive modeling has traditionally required preprocessing (e.g. taking…

Machine Learning · Computer Science 2019-11-18 Jonas Kemp , Alvin Rajkomar , Andrew M. Dai

Recent years have witnessed the great progress of deep neural networks on semantic segmentation, particularly in medical imaging. Nevertheless, training high-performing models require large amounts of pixel-level ground truth masks, which…

Computer Vision and Pattern Recognition · Computer Science 2020-04-10 Abdur R Feyjie , Reza Azad , Marco Pedersoli , Claude Kauffman , Ismail Ben Ayed , Jose Dolz

The research explores the utilization of a deep learning model employing an attention mechanism in medical text mining. It targets the challenge of analyzing unstructured text information within medical data. This research seeks to enhance…

Computation and Language · Computer Science 2024-06-04 Lingxi Xiao , Muqing Li , Yinqiu Feng , Meiqi Wang , Ziyi Zhu , Zexi Chen

Various deep learning algorithms have been developed to analyze different types of clinical data including clinical text classification and extracting information from 'free text' and so on. However, automate the keyword extraction from the…

Computation and Language · Computer Science 2019-10-25 Matthew Tang , Priyanka Gandhi , Md Ahsanul Kabir , Christopher Zou , Jordyn Blakey , Xiao Luo

Objective: Few-shot learning (FSL) methods require small numbers of labeled instances for training. As many medical topics have limited annotated textual data in practical settings, FSL-based natural language processing (NLP) methods hold…

Computation and Language · Computer Science 2022-05-02 Yao Ge , Yuting Guo , Yuan-Chi Yang , Mohammed Ali Al-Garadi , Abeed Sarker

Few-shot video object segmentation aims to reduce annotation costs; however, existing methods still require abundant dense frame annotations for training, which are scarce in the medical domain. We investigate an extremely low-data regime…

Computer Vision and Pattern Recognition · Computer Science 2025-03-20 Zixuan Zheng , Yilei Shi , Chunlei Li , Jingliang Hu , Xiao Xiang Zhu , Lichao Mou

Recurrent neural network architectures combining with attention mechanism, or neural attention model, have shown promising performance recently for the tasks including speech recognition, image caption generation, visual question answering…

Computation and Language · Computer Science 2016-04-04 Sheng-syun Shen , Hung-yi Lee

Clinician notes are a rich source of patient information but often contain inconsistencies due to varied writing styles, colloquialisms, abbreviations, medical jargon, grammatical errors, and non-standard formatting. These inconsistencies…

Computation and Language · Computer Science 2025-01-03 Daniel B. Hier , Michael D. Carrithers , Thanh Son Do , Tayo Obafemi-Ajayi

Training a neural network model that can quickly adapt to a new task is highly desirable yet challenging for few-shot learning problems. Recent few-shot learning methods mostly concentrate on developing various meta-learning strategies from…

Computer Vision and Pattern Recognition · Computer Science 2020-11-24 Zihang Jiang , Bingyi Kang , Kuangqi Zhou , Jiashi Feng
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