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Related papers: Not even wrong: Reply to Loreau and Hector

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In biodiversity and ecosystem functioning (BEF) research, the Loreau-Hector (LH) statistical scheme is widely-used to partition the effect of biodiversity on ecosystem properties into a "complementarity effect" and a "selection effect".…

Populations and Evolution · Quantitative Biology 2018-12-31 Pradeep Pillai , Tarik C. Gouhier

We demonstrate that the issues described in the Wagg et al. (2019) Comment on our paper (Pillai and Gouhier, 2019) are all due to misunderstandings about the implications of pairwise effects, the nature of the null baseline in both our…

Populations and Evolution · Quantitative Biology 2019-10-31 Pradeep Pillai , Tarik C. Gouhier

Resolving the relationship between biodiversity and ecosystem functioning has been one of the central goals of modern ecology. Early debates about the relationship were finally resolved with the advent of a statistical partitioning scheme…

Populations and Evolution · Quantitative Biology 2019-07-12 Pradeep Pillai , Tarik C. Gouhier

We demonstrate that the conclusions drawn by Lefcheck et al. (2019) regarding the positive effects of fish diversity on coral reef ecosystem functioning across scales are flawed because of a series of conceptual and statistical issues that…

Populations and Evolution · Quantitative Biology 2019-06-07 Tarik C. Gouhier , Pradeep Pillai

We find it absurd that Walliser [1] essentially used the same analysis and obtained identical results as reported in [3], yet arrived at different conclusions. Namely, based on an incomplete theory and using erroneous arguments, he not only…

Statistical Mechanics · Physics 2007-05-23 Daniel C. Hong , Paul V. Quinn , Stefan Luding

The need to harmonise apparently irreconcilable arrangements in an ecosystem --nestedness and segregation-- has triggered so far different strategies. Methodological refinements, or the inclusion of behavioural preferences to the network…

Physics and Society · Physics 2018-07-13 Albert Solé-Ribalta , Claudio J. Tessone , Carlo G. Ferrari , Javier Borge-Holthoefer

Bedau has developed a general set of evolutionary statistics that quantify the adaptive component of evolutionary processes. On the basis of these measures, he has proposed a set of 4 classes of evolutionary system. All artificial life…

Adaptation and Self-Organizing Systems · Physics 2009-09-29 Russell K. Standish

In astro-ph/0702542v2, Linder and Miquel seek to criticize the use of Bayesian model selection for data analysis and for survey forecasting and design. Their discussion is based on three serious misunderstandings of the conceptual…

We address the question of existence of sections of fibrations in two settings. First, we show that a bundle with base a finite 2-complex admits a section if and only if the inclusion of the fiber is $\pi_1$-injective and the associated…

Geometric Topology · Mathematics 2026-04-14 Jonathan A. Hillman , Riccardo Pedrotti

Diversity measurement underpins the study of biological systems, but measures used vary across disciplines. Despite their common use and broad utility, no unified framework has emerged for measuring, comparing and partitioning diversity.…

Quantitative Methods · Quantitative Biology 2016-12-09 Richard Reeve , Tom Leinster , Christina A. Cobbold , Jill Thompson , Neil Brummitt , Sonia N. Mitchell , Louise Matthews

Explaining biodiversity is a central focus in theoretical ecology. A significant obstacle arises from the Competitive Exclusion Principle (CEP), which states that two species competing for the same type of resources cannot coexist at…

Populations and Evolution · Quantitative Biology 2025-06-18 Ju Kang , Yiyuan Niu , Xin Wang

I would like to thank Junk and Lyons (arXiv:2009.06864) for beginning a discussion about replication in high-energy physics (HEP). Junk and Lyons ultimately argue that HEP learned its lessons the hard way through past failures and that…

Data Analysis, Statistics and Probability · Physics 2021-05-10 Andrew Fowlie

Berger et al., published in TOPLAS 2019, is a critique of our 2014 FSE conference abstract and its archival version, the 2017 CACM paper: A Large-Scale Study of Programming Languages and Code Quality in Github. In their paper Berger et al.…

Software Engineering · Computer Science 2019-11-19 Baishakhi Ray , Prem Devanbu , Vladimir Filkov

Whether or not biodiversity dynamics tend toward stable equilibria remains an unsolved question in ecology and evolution with important implications for our understanding of diversity and its conservation. Phylo/population genetic models…

Populations and Evolution · Quantitative Biology 2017-05-16 A. J. Rominger , I. Overcast , H. Krehenwinkel , R. G. Gillespie , J. Harte , M. J. Hickerson

This talk summarizes the results of a phenomenological analysis of heavy quark fragmentation data published by the CLEO and BELLE collaborations at \sqrt{s} = 10.6 GeV and by the LEP collaborations at \sqrt{s} = 91.2 GeV. Several…

High Energy Physics - Phenomenology · Physics 2008-11-26 Matteo Cacciari , Paolo Nason , Carlo Oleari

The storage effect is a general explanation for ecological coexistence, wherein different species specialize on different states of a fluctuating environment, e.g., hot vs. cold years. Despite the storage effect's prominence in theoretical…

Populations and Evolution · Quantitative Biology 2025-06-05 Evan C. Johnson , Sean R. Connolly

Species coexistence is one of the central themes in modern ecology. Coexistence is a prerequisite of biological diversity. However, the question arises how biodiversity can be reconciled with the statement of competition theory, which…

Populations and Evolution · Quantitative Biology 2007-08-17 Dalius Balciunas

The software program BAMM has been widely used to study the dynamics of speciation, extinction, and phenotypic evolution on phylogenetic trees. The program implements a model-based clustering algorithm to identify clades that share common…

Quantitative Methods · Quantitative Biology 2017-11-10 Daniel L Rabosky

In our original paper (Delavaux et al. 2024; https://www.nature.com/articles/s41586-024-07110-y), we find that the latitudinal diversity gradient (LDG) in plant species richness is reduced on oceanic islands worldwide. Moreover, we find…

Populations and Evolution · Quantitative Biology 2025-05-28 Camille Delavaux , Thomas Crowther , James Bever , Evan Gora

We point out that the mixed-event method for two-particle acceptance correction, widely used in particle correlation measurements at RHIC and LHC, is wrong in cases where the single particle pseudorapidity distribution is significantly…

Nuclear Experiment · Physics 2014-01-03 Lingshan Xu , Chin-Hao Chen , Fuqiang Wang
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