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In this paper we examine the use of topological methods for multivariate statistics. Using persistent homology from computational algebraic topology, a random sample is used to construct estimators of persistent homology. This estimation…

Statistics Theory · Mathematics 2021-01-29 Peter Bubenik , Gunnar Carlsson , Peter T. Kim , Zhiming Luo

This paper deals with a clustering algorithm for histogram data based on a Self-Organizing Map (SOM) learning. It combines a dimension reduction by SOM and the clustering of the data in a reduced space. Related to the kind of data, a…

Machine Learning · Computer Science 2021-09-10 Guénaël Cabanes , Younès Bennani , Rosanna Verde , Antonio Irpino

Semi-supervised clustering seeks to augment traditional clustering methods by incorporating side information provided via human expertise in order to increase the semantic meaningfulness of the resulting clusters. However, most current…

Machine Learning · Computer Science 2014-02-17 Caiming Xiong , David Johnson , Jason J. Corso

Phase separation mechanisms can produce a variety of complicated and intricate microstructures, which often can be difficult to characterize in a quantitative way. In recent years, a number of novel topological metrics for microstructures…

Numerical Analysis · Mathematics 2020-05-29 Paweł Dłotko , Thomas Wanner

Racial segregation is a widespread social and physical phenomenon present in every city across the United States. Although prevalent nationwide, each city has a unique history of racial segregation, resulting in distinct "shapes" of…

Social and Information Networks · Computer Science 2024-10-16 Ori Friesen , Lori Ziegelmeier

Subspace clustering algorithms are used for understanding the cluster structure that explains the dataset well. These methods are extensively used for data-exploration tasks in various areas of Natural Sciences. However, most of these…

Machine Learning · Computer Science 2022-11-15 Ashutosh Singh , Ashish Singh , Aria Masoomi , Tales Imbiriba , Erik Learned-Miller , Deniz Erdogmus

Unsupervised classification called clustering is a process of organizing objects into groups whose members are similar in some way. Clustering of uncertain data objects is a challenge in spatial data bases. In this paper we use Probability…

Databases · Computer Science 2013-12-10 Ramachandra Rao Kurada

We develop a novel algorithm for feature extraction in time series data by leveraging tools from topological data analysis. Our algorithm provides a simple, efficient way to successfully harness topological features of the attractor of the…

Computational Geometry · Computer Science 2019-06-05 Kwangho Kim , Jisu Kim , Alessandro Rinaldo

We describe a new methodology for studying persistence of topological features across a family of spaces or point-cloud data sets, called zigzag persistence. Building on classical results about quiver representations, zigzag persistence…

Computational Geometry · Computer Science 2008-12-02 Gunnar Carlsson , Vin de Silva

Unsupervised learning has gained prominence in the big data era, offering a means to extract valuable insights from unlabeled datasets. Deep clustering has emerged as an important unsupervised category, aiming to exploit the non-linear…

Machine Learning · Computer Science 2024-02-02 Georgios Vardakas , Ioannis Papakostas , Aristidis Likas

This paper contains an expository account of persistent homology and its usefulness for topological data analysis. An alternative foundation for level-set persistence is presented using sheaves and cosheaves.

Algebraic Topology · Mathematics 2015-03-05 Justin Curry

Spectral clustering is one of the most prominent clustering approaches. The distance-based similarity is the most widely used method for spectral clustering. However, people have already noticed that this is not suitable for multi-scale…

Machine Learning · Computer Science 2020-09-11 Hengrui Wang , Yubo Zhang , Mingzhi Chen , Tong Yang

In this paper we present a new dynamical systems algorithm for clustering in hyperspectral images. The main idea of the algorithm is that data points are \`pushed\' in the direction of increasing density and groups of pixels that end up in…

Computer Vision and Pattern Recognition · Computer Science 2022-07-22 William F. Basener , Alexey Castrodad , David Messinger , Jennifer Mahle , Paul Prue

Persistent homology computes the multiscale topology of a data set by using a sequence of discrete complexes. In this paper, we propose that persistent homology may be a useful tool for studying the structure of the landscape of string…

High Energy Physics - Theory · Physics 2019-04-24 Alex Cole , Gary Shiu

In many modern statistical problems, the limited available data must be used both to develop the hypotheses to test, and to test these hypotheses-that is, both for exploratory and confirmatory data analysis. Reusing the same dataset for…

Methodology · Statistics 2023-07-24 Youngjoo Yun , Rina Foygel Barber

We outline a novel clustering scheme for simplicial complexes that produces clusters of simplices in a way that is sensitive to the homology of the complex. The method is inspired by, and can be seen as a higher-dimensional version of,…

Machine Learning · Computer Science 2020-06-23 Stefania Ebli , Gard Spreemann

Clustering, as an unsupervised technique, plays a pivotal role in various data analysis applications. Among clustering algorithms, Spectral Clustering on Euclidean Spaces has been extensively studied. However, with the rapid evolution of…

Machine Learning · Computer Science 2024-12-09 Sagar Ghosh , Swagatam Das

Feature extraction in noisy image datasets presents many challenges in model reliability. In this paper, we use the discrete Fourier transform in conjunction with persistent homology analysis to extract specific frequencies that correspond…

Computer Vision and Pattern Recognition · Computer Science 2025-12-09 Anil Chintapalli , Peter Tenholder , Henry Chen , Arjun Rao

We employ unsupervised machine learning to enhance the accuracy of our recently presented scaling method for wave confinement analysis [1]. We employ the standard k-means++ algorithm as well as our own model-based algorithm. We investigate…

In this paper, we derive a simple method for separating topological noise from topological features using a novel measure for comparing persistence barcodes called persistent entropy.

Information Theory · Computer Science 2016-05-11 Nieves Atienza , Rocio Gonzalez-Diaz , Matteo Rucco