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In this paper, we present fixed-parameter tractability algorithms for both the undirected and directed versions of the Spanning Tree Isomorphism Problem, parameterized by the size $k$ of a redundant set. A redundant set is a collection of…

Data Structures and Algorithms · Computer Science 2025-08-08 Fangjian Shen , Yicheng Zheng , Wushao Wen , Hankz Hankui Zhuo

This paper introduces a novel method for approximating the dynamics of a large autonomous system projected onto a fixed subspace. The core contribution is a novel recursive algorithm to construct an effective time-dependent generator that…

Quantum Physics · Physics 2025-10-24 Tommaso Grigoletto

We consider the problem of high-dimensional Ising (graphical) model selection. We propose a simple algorithm for structure estimation based on the thresholding of the empirical conditional variation distances. We introduce a novel criterion…

Machine Learning · Statistics 2012-08-21 Animashree Anandkumar , Vincent Y. F. Tan , Furong Huang , Alan S. Willsky

We present a new approach to a classical problem in statistical physics: estimating the partition function and other thermodynamic quantities of the ferromagnetic Ising model. Markov chain Monte Carlo methods for this problem have been…

Statistical Mechanics · Physics 2013-06-20 Amanda Streib , Noah Streib , Isabel Beichl , Francis Sullivan

We investigate a relaxation of the notion of fractional treewidth-fragility, namely fractional tree-independence-number-fragility. In particular, we obtain polynomial-time approximation schemes for meta-problems such as finding a…

Data Structures and Algorithms · Computer Science 2025-04-23 Esther Galby , Andrea Munaro , Shizhou Yang

Probabilistic representations, such as Bayesian and Markov networks, are fundamental to much of statistical machine learning. Thus, learning probabilistic representations directly from data is a deep challenge, the main computational…

Machine Learning · Computer Science 2018-09-20 Andreas Bueff , Stefanie Speichert , Vaishak Belle

Floor-planning is a fundamental step in VLSI chip design. Based upon the concept of orderly spanning trees, we present a simple O(n)-time algorithm to construct a floor-plan for any n-node plane triangulation. In comparison with previous…

Data Structures and Algorithms · Computer Science 2007-05-23 Chien-Chih Liao , Hsueh-I Lu , Hsu-Chun Yen

We introduce a continuous domain framework for the recovery of a planar curve from a few samples. We model the curve as the zero level set of a trigonometric polynomial. We show that the exponential feature maps of the points on the curve…

Signal Processing · Electrical Eng. & Systems 2020-01-08 Qing Zou , Sunrita Poddar , Mathews Jacob

We consider the probability that a spanning tree chosen uniformly at random from a graph can be partitioned into a fixed number $k$ of trees of equal size by removing $k-1$ edges. In that case, the spanning tree is called {\em splittable}.…

Data Structures and Algorithms · Computer Science 2026-02-25 David Gillman , Jacob Platnick , Dana Randall

Daily internet communication relies heavily on tree-structured graphs, embodied by popular data formats such as XML and JSON. However, many recent generative (probabilistic) models utilize neural networks to learn a probability distribution…

Machine Learning · Computer Science 2024-08-20 Milan Papež , Martin Rektoris , Tomáš Pevný , Václav Šmídl

We consider a zero-field Ising model defined on a quasiperiodic graph, the so-called Labyrinth tiling. Exact information about the critical behaviour is obtained from duality arguments and the subclass of models which yield commuting…

Statistical Mechanics · Physics 2007-05-23 Uwe Grimm , Michael Baake , Harald Simon

The \emph{maximum a posteriori} (MAP) assignment for general structure Markov random fields (MRFs) is computationally intractable. In this paper, we exploit tree-based methods to efficiently address this problem. Our novel method, named…

Artificial Intelligence · Computer Science 2014-07-23 Truyen Tran , Dinh Phung , Svetha Venkatesh

We design an irreversible worm algorithm for the zero-field ferromagnetic Ising model by using the lifting technique. We study the dynamic critical behavior of an energy estimator on both the complete graph and toroidal grids, and compare…

Statistical Mechanics · Physics 2018-04-25 Eren Metin Elçi , Jens Grimm , Lijie Ding , Abrahim Nasrawi , Timothy M. Garoni , Youjin Deng

This paper gives a new algorithm for sampling tree-weighted partitions of a large class of planar graphs. Formally, the tree-weighted distribution on $k$-partitions of a graph weights $k$-partitions proportional to the product of the number…

Data Structures and Algorithms · Computer Science 2026-05-08 Sarah Cannon , Topher Pankow , Wesley Pegden , Jamie Tucker-Foltz

Several variants of the Constraint Satisfaction Problem have been proposed and investigated in the literature for modelling those scenarios where solutions are associated with some given costs. Within these frameworks computing an optimal…

Artificial Intelligence · Computer Science 2012-09-18 Georg Gottlob , Gianluigi Greco , Francesco Scarcello

Mathematical modeling is a standard approach to solve many real-world problems and {\em diversity} of solutions is an important issue, emerging in applying solutions obtained from mathematical models to real-world problems. Many studies…

Data Structures and Algorithms · Computer Science 2020-12-15 Tesshu Hanaka , Yasuaki Kobayashi , Kazuhiro Kurita , Yota Otachi

We solve the subgraph isomorphism problem in planar graphs in linear time, for any pattern of constant size. Our results are based on a technique of partitioning the planar graph into pieces of small tree-width, and applying dynamic…

Data Structures and Algorithms · Computer Science 2007-05-23 David Eppstein

Influence Diagrams (ID) are a flexible tool to represent discrete stochastic optimization problems, including Markov Decision Process (MDP) and Partially Observable MDP as standard examples. More precisely, given random variables considered…

Optimization and Control · Mathematics 2019-07-08 Axel Parmentier , Victor Cohen , Vincent Leclère , Guillaume Obozinski , Joseph Salmon

We describe a framework for counting and enumerating various types of crossing-free geometric graphs on a planar point set. The framework generalizes ideas of Alvarez and Seidel, who used them to count triangulations in time $O(2^nn^2)$…

Computational Geometry · Computer Science 2016-04-20 Manuel Wettstein

Finding the ground states of the Ising Hamiltonian [1] maps to various combinatorial optimization problems in biology, medicine, wireless communications, artificial intelligence, and social network. So far no efficient classical and quantum…

Quantum Physics · Physics 2014-10-30 Alireza Marandi , Zhe Wang , Kenta Takata , Robert L. Byer , Yoshihisa Yamamoto