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Tabular datasets are widely used in scientific disciplines such as biology. While these disciplines have already adopted AI methods to enhance their findings and analysis, they mainly use tree-based methods due to their interpretability. At…

Machine Learning · Computer Science 2025-04-16 Salvatore Raieli , Nathalie Jeanray , Stéphane Gerart , Sebastien Vachenc , Abdulrahman Altahhan

We propose a mesh-based technique to aid in the classification of Alzheimer's disease dementia (ADD) using mesh representations of the cortex and subcortical structures. Deep learning methods for classification tasks that utilize structural…

Image and Video Processing · Electrical Eng. & Systems 2022-03-14 Emanuel A. Azcona , Pierre Besson , Yunan Wu , Arjun Punjabi , Adam Martersteck , Amil Dravid , Todd B. Parrish , S. Kathleen Bandt , Aggelos K. Katsaggelos

Artificial intelligence (AI) holds great promise for supporting clinical trials, from patient recruitment and endpoint assessment to treatment response prediction. However, deploying AI without safeguards poses significant risks,…

Machine Learning · Computer Science 2025-10-09 Yao Chen , David Ohlssen , Aimee Readie , Gregory Ligozio , Ruvie Martin , Thibaud Coroller

Natural Language Processing (NLP) is a key technique for developing Medical Artificial Intelligence (AI) systems that leverage Electronic Health Record (EHR) data to build diagnostic and prognostic models. NLP enables the conversion of…

Answer Set Programming (ASP) emerged in the late 1990ies as a paradigm for Knowledge Representation and Reasoning. The attractiveness of ASP builds on an expressive high-level modeling language along with the availability of powerful…

Artificial Intelligence · Computer Science 2021-09-20 Mario Alviano , Wolfgang Faber , Martin Gebser

The development of large-scale artificial intelligence (AI) models is influencing neuroscience research by enabling end-to-end learning from raw brain signals and neural data. In this paper, we review applications of large-scale AI models…

Assumption-based Argumentation (ABA) is advocated as a unifying formalism for various forms of non-monotonic reasoning, including logic programming. It allows capturing defeasible knowledge, subject to argumentative debate. While, in much…

Artificial Intelligence · Computer Science 2024-11-11 Emanuele De Angelis , Maurizio Proietti , Francesca Toni

Human brains lie at the core of complex neurobiological systems, where the neurons, circuits, and subsystems interact in enigmatic ways. Understanding the structural and functional mechanisms of the brain has long been an intriguing pursuit…

Neurons and Cognition · Quantitative Biology 2022-07-26 Hejie Cui , Wei Dai , Yanqiao Zhu , Xiaoxiao Li , Lifang He , Carl Yang

Answer-Set Programming (ASP) is a powerful and expressive knowledge representation paradigm with a significant number of applications in logic-based AI. The traditional ground-and-solve approach, however, requires ASP programs to be…

Artificial Intelligence · Computer Science 2020-08-11 Antonius Weinzierl , Richard Taupe , Gerhard Friedrich

We introduce an approach to detecting inconsistencies in large biological networks by using Answer Set Programming (ASP). To this end, we build upon a recently proposed notion of consistency between biochemical/genetic reactions and…

Logic in Computer Science · Computer Science 2010-07-02 Martin Gebser , Torsten Schaub , Sven Thiele , Philippe Veber

Recent studies have made great progress in functional brain network classification by modeling the brain as a network of Regions of Interest (ROIs) and leveraging their connections to understand brain functionality and diagnose mental…

Neurons and Cognition · Quantitative Biology 2025-07-22 Jiacheng Hou , Zhenjie Song , Ercan Engin Kuruoglu

Depression has affected millions of people worldwide and has become one of the most common mental disorders. Early mental disorder detection can reduce costs for public health agencies and prevent other major comorbidities. Additionally,…

Computation and Language · Computer Science 2024-04-09 Giuliano Lorenzoni , Cristina Tavares , Nathalia Nascimento , Paulo Alencar , Donald Cowan

Large Language Models (LLMs) have demonstrated remarkable performance across a broad spectrum of tasks, including natural language understanding, dialogue systems, and code generation. Despite evident progress, less attention has been paid…

Logic in Computer Science · Computer Science 2026-04-27 Manuel Alejandro Borroto Santana , Erica Coppolillo , Francesco Calimeri , Giuseppe Manco , Simona Perri , Francesco Ricca

Autistic Spectrum Disorder (ASD) is a neurological disease characterized by difficulties with social interaction, communication, and repetitive activities. While its primary origin lies in genetics, early detection is crucial, and…

Machine Learning · Computer Science 2023-12-29 Rownak Ara Rasul , Promy Saha , Diponkor Bala , S M Rakib Ul Karim , Md. Ibrahim Abdullah , Bishwajit Saha

Machine learning (ML) techniques play a pivotal role in high-stakes domains such as healthcare, where accurate predictions can greatly enhance decision-making. However, most high-performing methods such as neural networks and ensemble…

Artificial Intelligence · Computer Science 2026-01-08 Sanne Wielinga , Jesse Heyninck

Recent advancements in artificial intelligence have propelled the capabilities of Large Language Models, yet their ability to mimic nuanced human reasoning remains limited. This paper introduces a novel conceptual enhancement to LLMs,…

Human-Computer Interaction · Computer Science 2024-04-23 Sumedh Rasal

The work we describe here is a part of a research program of developing foundations of declarative solving of search problems. We consider the model expansion task as the task representing the essence of search problems where we are given…

Logic in Computer Science · Computer Science 2011-09-06 Shahab Tasharrofi , Xiongnan , Wu , Eugenia Ternovska

Despite deep learning (DL) has achieved remarkable progress in various domains, the DL models are still prone to making mistakes. This issue necessitates effective debugging tools for DL practitioners to interpret the decision-making…

Computer Vision and Pattern Recognition · Computer Science 2023-10-18 Yeong-Joon Ju , Ji-Hoon Park , Seong-Whan Lee

Answer Set Programming (ASP) is one of the major declarative programming paradigms in the area of logic programming and non-monotonic reasoning. Despite that ASP features a simple syntax and an intuitive semantics, errors are common during…

Artificial Intelligence · Computer Science 2020-02-19 Carmine Dodaro , Philip Gasteiger , Kristian Reale , Francesco Ricca , Konstantin Schekotihin

Objective Alzheimer disease (AD) is the most common cause of dementia, a syndrome characterized by cognitive impairment severe enough to interfere with activities of daily life. We aimed to conduct a systematic literature review (SLR) of…

Quantitative Methods · Quantitative Biology 2021-08-31 Sayantan Kumar , Inez Oh , Suzanne Schindler , Albert M Lai , Philip R O Payne , Aditi Gupta