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Considering higher-order interactions allows for a more comprehensive understanding of network structures beyond simple pairwise connections. While leveraging all cliques in a network to handle higher-order interactions is intuitive, it…

Social and Information Networks · Computer Science 2025-09-30 Eunho Koo , Tongseok Lim

Many networked systems are governed by non-pairwise interactions between nodes. The resulting higher-order interaction structure can then be encoded by means of a hypernetwork. In this paper we consider dynamical systems on hypernetworks by…

Dynamical Systems · Mathematics 2023-08-11 Sören von der Gracht , Eddie Nijholt , Bob Rink

In recent years there has been a growing interest in the role of networks and clusters in the global economy. Despite being a popular research topic in economics, sociology and urban studies, geographical clustering of human activity has…

Physics and Society · Physics 2015-05-19 Roberto Catini , Dmytro Karamshuk , Orion Penner , Massimo Riccaboni

Multi-view clustering has attracted much attention thanks to the capacity of multi-source information integration. Although numerous advanced methods have been proposed in past decades, most of them generally overlook the significance of…

Computer Vision and Pattern Recognition · Computer Science 2023-05-08 Rui Chen , Yongqiang Tang , Wensheng Zhang , Wenlong Feng

Clustering-based methods, which alternate between the generation of pseudo labels and the optimization of the feature extraction network, play a dominant role in both unsupervised learning (USL) and unsupervised domain adaptive (UDA) person…

Computer Vision and Pattern Recognition · Computer Science 2022-06-15 Tianyi Yan , Kuan Zhu , Haiyun guo , Guibo Zhu , Ming Tang , Jinqiao Wang

Spatial clustering is a crucial field, finding universal use across criminology, pathology, and urban planning. However, most spatial clustering algorithms cannot pull information from nearby nodes and suffer performance drops when dealing…

Machine Learning · Computer Science 2025-03-12 Aidan Gao , Junhong Lin

Deep generative models trained with large amounts of unlabelled data have proven to be powerful within the domain of unsupervised learning. Many real life data sets contain a small amount of labelled data points, that are typically…

Machine Learning · Statistics 2017-04-04 Lars Maaløe , Marco Fraccaro , Ole Winther

Heterogeneous Information Network (HIN) embedding refers to the low-dimensional projections of the HIN nodes that preserve the HIN structure and semantics. HIN embedding has emerged as a promising research field for network analysis as it…

Machine Learning · Computer Science 2021-08-10 Rayyan Ahmad Khan , Martin Kleinsteuber

Semi-supervised clustering is the task of clustering data points into clusters where only a fraction of the points are labelled. The true number of clusters in the data is often unknown and most models require this parameter as an input.…

Machine Learning · Computer Science 2013-09-27 Amar Shah , Zoubin Ghahramani

In many real-world network datasets such as co-authorship, co-citation, email communication, etc., relationships are complex and go beyond pairwise. Hypergraphs provide a flexible and natural modeling tool to model such complex…

Machine Learning · Computer Science 2019-05-23 Naganand Yadati , Madhav Nimishakavi , Prateek Yadav , Vikram Nitin , Anand Louis , Partha Talukdar

Deep learning has demonstrated abilities to learn complex structures, but they can be restricted by available data. Recently, Consensus Networks (CNs) were proposed to alleviate data sparsity by utilizing features from multiple modalities,…

Machine Learning · Computer Science 2018-11-20 Zining Zhu , Jekaterina Novikova , Frank Rudzicz

Unsupervised graph representation learning aims to learn low-dimensional node embeddings without supervision while preserving graph topological structures and node attributive features. Previous graph neural networks (GNN) require a large…

Machine Learning · Computer Science 2020-09-04 Yanqiao Zhu , Yichen Xu , Feng Yu , Shu Wu , Liang Wang

Next generation sequencing of B cell receptor (BCR) repertoires has become a ubiquitous tool for understanding the antibody-mediated immune response: it is now common to have large volumes of sequence data coding for both the heavy and…

Genomics · Quantitative Biology 2023-01-11 Duncan K. Ralph , Frederick A. Matsen

Existing Multi-view Clustering (MVC) methods based on subspace learning focus on consensus representation learning while neglecting the inherent topological structure of data. Despite the integration of Graph Neural Networks (GNNs) into…

Computer Vision and Pattern Recognition · Computer Science 2025-11-11 Chenping Pei , Fadi Dornaika , Jingjun Bi

Graph neural networks (GNNs) achieve remarkable success in graph-based semi-supervised node classification, leveraging the information from neighboring nodes to improve the representation learning of target node. The success of GNNs at node…

Machine Learning · Computer Science 2020-07-28 Bingbing Xu , Junjie Huang , Liang Hou , Huawei Shen , Jinhua Gao , Xueqi Cheng

Supervised deep learning algorithms have enabled significant performance gains in medical image classification tasks. But these methods rely on large labeled datasets that require resource-intensive expert annotation. Semi-supervised…

Genetic variants identified to date by genome-wide association studies only explain a small fraction of total heritability. Gene-by-gene interaction is one important potential source of unexplained heritability. In the first part of this…

Methodology · Statistics 2016-05-10 Chen Lu

Cluster analysis methods are used to identify homogeneous subgroups in a data set. In biomedical applications, one frequently applies cluster analysis in order to identify biologically interesting subgroups. In particular, one may wish to…

Methodology · Statistics 2016-09-23 Sheila Gaynor , Eric Bair

Much of the natural variation for a complex trait can be explained by variation in DNA sequence levels. As part of sequence variation, gene-gene interaction has been ubiquitously observed in nature, where its role in shaping the development…

Applications · Statistics 2012-10-01 Shaoyu Li , Yuehua Cui

Cluster or group randomized trials (CRTs) are increasingly used for both behavioral and system-level interventions, where entire clusters are randomly assigned to a study condition or intervention. Apart from the assigned cluster-level…

Methodology · Statistics 2024-11-19 Shubhadeep Chakraborty , Bo Wang , Ram Tiwari , Samiran Ghosh