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The stiffness of the Hodgkin-Huxley (HH) equations during an action potential (spike) limits the use of large time steps. We observe that the neurons can be evolved independently between spikes, $i.e.,$ different neurons can be evolved with…
Exponential time differencing methods is a power tool for high-performance numerical simulation of computationally challenging problems in condensed matter physics, fluid dynamics, chemical and biological physics, where mathematical models…
Matrix evolution equations occur in many applications, such as dynamical Lyapunov/Sylvester systems or Riccati equations in optimization and stochastic control, machine learning or data assimilation. In many such problems, the dominant…
A second-order $L$-stable exponential time-differencing (ETD) method is developed by combining an ETD scheme with approximating the matrix exponentials by rational functions having real distinct poles (RDP), together with a dimensional…
In this paper, we present a rigorous proof of the convergence of first order and second order exponential time differencing (ETD) schemes for solving the nonlocal Cahn-Hilliard (NCH) equation. The spatial discretization employs the Fourier…
A fourth-order exponential time differencing (ETD) Runge-Kutta scheme with dimensional splitting is developed to solve multidimensional non-linear systems of reaction-diffusion equations (RDE). By approximating the matrix exponential in the…
In this paper, a stabilized second order in time accurate linear exponential time differencing (ETD) scheme for the no-slope-selection thin film growth model is presented. An artificial stabilizing term $A\tau^2\frac{\partial\Delta^2…
In this paper, we study high-order exponential time differencing Runge-Kutta (ETD-RK) discontinuous Galerkin (DG) methods for nonlinear degenerate parabolic equations. This class of equations exhibits hyperbolic behavior in degenerate…
We present a modified library-based method for simulating the Hodgkin-Huxley (HH) neuronal networks. By pre-computing a high resolution data library during the interval of an action potential (spike), we can avoid evolving the HH equations…
It is well known that the exponential time differencing (ETD) method has been successfully applied to the classic Cahn-Hilliard equation with double well potential. However, this numerical method can not be extended to the Cahn-Hilliard…
Two ocean models are considered for geophysical flow simulations: the multi-layer shallow water equations and the multi-layer primitive equations. For the former, we investigate the parallel performance of exponential time differencing…
Equilibrium propagation (EP) is a biologically plausible alternative to backpropagation for training neural networks. However, existing EP models use a uniform scalar time step dt, which corresponds biologically to a membrane time constant…
In this paper, the efficient hinging hyperplanes (EHH) neural network is proposed based on the model of hinging hyperplanes (HH). The EHH neural network is a distributed representation, the training of which involves solving several convex…
This paper introduces an adaptive time splitting technique for the solution of stiff evolutionary PDEs that guarantees an effective error control of the simulation, independent of the fastest physical time scale for highly unsteady…
In this paper, we propose and analyze ETD-Multistep-Pad\'{e} (ETD-MS-Pad\'{e}) and ETD Implicit Multistep-Pad\'{e} (ETD-IMS-Pad\'{e}) for semilinear parabolic delay differential equations with smooth solutions. In our previous work [15], we…
The implementation of the discrete adjoint method for exponential time differencing (ETD) schemes is considered. This is important for parameter estimation problems that are constrained by stiff time-dependent PDEs when the discretized PDE…
In this paper we propose and analyze a (temporally) third order accurate exponential time differencing (ETD) numerical scheme for the no-slope-selection (NSS) equation of the epitaxial thin film growth model, with Fourier pseudo-spectral…
Temporal difference (TD) methods constitute a class of methods for learning predictions in multi-step prediction problems, parameterized by a recency factor lambda. Currently the most important application of these methods is to temporal…
We compare six numerical integrators' performance when simulating a regular spiking cortical neuron model whose 74-compartments are equipped with eleven membrane ion channels and Calcium dynamics. Four methods are explicit and two are…
We introduce a new class of arbitrary-order exponential time differencing methods based on spectral deferred correction (ETDSDC) and describe a simple procedure for initializing the requisite matrix functions. We compare the stability and…