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This paper presents several algorithms for hashing directed graphs. The algorithms given are capable of hashing entire graphs as well as assigning hash values to specific nodes in a given graph. The notion of node symmetry is made precise…

Discrete Mathematics · Computer Science 2023-06-21 Caleb Helbling

We introduce Mayer path homology, a new homology theory for directed path complexes obtained by equipping path complexes with an $N$-nilpotent differential. The main novelty of this work is the introduction of an $N$-differential on path…

Algebraic Topology · Mathematics 2026-05-19 Dilan Karaguler , Guo-Wei Wei

Directed graphs arise in many applications where computing persistent homology helps to encode the shape and structure of the input information. However, there are only a few ways to turn the directed graph information into an undirected…

Computational Geometry · Computer Science 2026-04-30 David E. Muñoz , Elizabeth Munch , Firas A. Khasawneh

We comprehensively studied the morphology of the self-organized effective network structures that form in simple coupled maps with interelement synchronization-dependent connection changes. Based on the parameter values, the spontaneous…

Adaptation and Self-Organizing Systems · Physics 2022-02-09 Taito Nakanishi , Masashi Fujii , Akinori Awazu

The representations learned by deep neural networks are difficult to interpret in part due to their large parameter space and the complexities introduced by their multi-layer structure. We introduce a method for computing persistent…

Machine Learning · Computer Science 2019-05-31 Thomas Gebhart , Paul Schrater , Alan Hylton

Characterizing the structural properties of neural networks is crucial yet poorly understood, and there are no well-established similarity measures between networks. In this work, we observe that neural networks can be represented as…

Machine Learning · Computer Science 2021-06-01 David Pérez-Fernández , Asier Gutiérrez-Fandiño , Jordi Armengol-Estapé , Marta Villegas

In this paper we show that feedforward neural networks corresponding to arbitrary directed acyclic graphs undergo transition to linearity as their "width" approaches infinity. The width of these general networks is characterized by the…

Machine Learning · Computer Science 2023-06-13 Libin Zhu , Chaoyue Liu , Mikhail Belkin

High order networks are weighted hypergraphs col- lecting relationships between elements of tuples, not necessarily pairs. Valid metric distances between high order networks have been defined but they are difficult to compute when the…

Social and Information Networks · Computer Science 2016-05-04 Weiyu Huang , Alejandro Ribeiro

This paper develops a structural theory of unique shortest paths in real-weighted graphs. Our main goal is to characterize exactly which sets of node sequences, which we call path systems, can be realized as unique shortest paths in a graph…

Data Structures and Algorithms · Computer Science 2018-10-18 Greg Bodwin

Topological features based on persistent homology capture high-order structural information so as to augment graph neural network methods. However, computing extended persistent homology summaries remains slow for large and dense graphs and…

Machine Learning · Computer Science 2022-11-16 Zuoyu Yan , Tengfei Ma , Liangcai Gao , Zhi Tang , Yusu Wang , Chao Chen

While there has been much interest in adapting conventional clustering procedures---and in higher dimensions, persistent homology methods---to directed networks, little is known about the convergence of such methods. In order to even…

Computational Geometry · Computer Science 2022-12-20 Samir Chowdhury , Facundo Mémoli

Directed networks such as gene regulation networks and neural networks are connected by arcs (directed links). The nodes in a directed network are often strongly interwound by a huge number of directed cycles, which lead to complex…

Physics and Society · Physics 2017-08-02 Jin-Hua Zhao , Hai-Jun Zhou

There have been several attempts to mathematically understand neural networks and many more from biological and computational perspectives. The field has exploded in the last decade, yet neural networks are still treated much like a black…

Neural and Evolutionary Computing · Computer Science 2016-12-09 Sven Cattell

The relations, rather than the elements, constitute the structure of networks. We therefore develop a systematic approach to the analysis of networks, modelled as graphs or hypergraphs, that is based on structural properties of…

Discrete Mathematics · Computer Science 2020-12-08 Marzieh Eidi , Amirhossein Farzam , Wilmer Leal , Areejit Samal , Jürgen Jost

Despite significant advances in the field of deep learning in ap-plications to various areas, an explanation of the learning pro-cess of neural network models remains an important open ques-tion. The purpose of this paper is a comprehensive…

Machine Learning · Computer Science 2023-06-07 German Magai

Structural features are important features in a geometrical graph. Although there are some correlation analysis of features based on covariance, there is no relevant research on structural feature correlation analysis with graph neural…

Machine Learning · Computer Science 2022-05-03 Jiaqing Xie , Rex Ying

We introduce a persistent Hochschild homology framework for directed graphs. Hochschild homology groups of (path algebras of) directed graphs vanish in degree $i\geq 2$. To extend them to higher degrees, we introduce the notion of…

Algebraic Topology · Mathematics 2023-08-17 Luigi Caputi , Henri Riihimäki

In the past two decades, significant advances have been made in understanding the structural and functional properties of biological networks, via graph-theoretic analysis. In general, most graph-theoretic studies are conducted in the…

Physics and Society · Physics 2013-10-21 Michelle Rudolph-Lilith , Lyle E. Muller

With the growth of deep learning, how to describe deep neural networks unifiedly is becoming an important issue. We first formalize neural networks mathematically with their directed graph representations, and prove a generation theorem…

Machine Learning · Computer Science 2018-05-11 Yujian Li , Chuanhui Shan

In this article we show the duality between tensor networks and undirected graphical models with discrete variables. We study tensor networks on hypergraphs, which we call tensor hypernetworks. We show that the tensor hypernetwork on a…

Statistics Theory · Mathematics 2017-10-05 Elina Robeva , Anna Seigal