Related papers: Comprehend Medical: a Named Entity Recognition and…
Multiple entities in a document generally exhibit complex inter-sentence relations, and cannot be well handled by existing relation extraction (RE) methods that typically focus on extracting intra-sentence relations for single entity pairs.…
Electronic Health Records (EHRs) hold immense potential for advancing healthcare, offering rich, longitudinal data that combines structured information with valuable insights from unstructured clinical notes. However, the unstructured…
Named Entity Recognition (NER) models play a crucial role in various NLP tasks, including information extraction (IE) and text understanding. In academic writing, references to machine learning models and datasets are fundamental components…
In the era of big data, there is an increasing need for healthcare providers, communities, and researchers to share data and collaborate to improve health outcomes, generate valuable insights, and advance research. The Health Insurance…
Named entity recognition (NER) is one of the tasks in natural language processing that can greatly benefit from the use of external knowledge sources. We propose a named entity recognition framework composed of knowledge-based feature…
The goals of the Triple Aim of health care and the goals of P4 medicine outline objectives that require a significant health informatics component. However, the goals do not provide specifications about how all of the new individual patient…
Understanding the meaning of text often involves reasoning about entities and their relationships. This requires identifying textual mentions of entities, linking them to a canonical concept, and discerning their relationships. These tasks…
Reading and understanding text is one important component in computer aided diagnosis in clinical medicine, also being a major research problem in the field of NLP. In this work, we introduce a question-answering task called MedQA to study…
This study proposes a Transformer-based longitudinal modeling method to address challenges in clinical risk classification with heterogeneous Electronic Health Record (EHR) data, including irregular temporal patterns, large modality…
Named Entity Recognition and Disambiguation (NERD) systems have recently been widely researched to deal with the significant growth of the Web. NERD systems are crucial for several Natural Language Processing (NLP) tasks such as…
In recent years, Deep Learning (DL) models are becoming important due to their demonstrated success at overcoming complex learning problems. DL models have been applied effectively for different Natural Language Processing (NLP) tasks such…
Relation extraction (RE) aims to identify the semantic relations between named entities in text. Recent years have witnessed it raised to the document level, which requires complex reasoning with entities and mentions throughout an entire…
Relation extraction (RE) aims at extracting the relation between two entities from the text corpora. It is a crucial task for Knowledge Graph (KG) construction. Most existing methods predict the relation between an entity pair by learning…
Exponential growth in Electronic Healthcare Records (EHR) has resulted in new opportunities and urgent needs for discovery of meaningful data-driven representations and patterns of diseases in Computational Phenotyping research. Deep…
The widespread availability of electronic health records (EHRs) promises to usher in the era of personalized medicine. However, the problem of extracting useful clinical representations from longitudinal EHR data remains challenging. In…
Confidentiality of patient information is an essential part of Electronic Health Record System. Patient information, if exposed, can cause a serious damage to the privacy of individuals receiving healthcare. Hence it is important to remove…
As hospitals move towards automating and integrating their computing systems, more fine-grained hospital operations data are becoming available. These data include hospital architectural drawings, logs of interactions between patients and…
Electronic health records (EHRs) are designed to synthesize diverse data types, including unstructured clinical notes, structured lab tests, and time-series visit data. Physicians draw on these multimodal and temporal sources of EHR data to…
Named Entity Recognition (NER) is a key component in NLP systems for question answering, information retrieval, relation extraction, etc. NER systems have been studied and developed widely for decades, but accurate systems using deep neural…
Negative medical findings are prevalent in clinical reports, yet discriminating them from positive findings remains a challenging task for information extraction. Most of the existing systems treat this task as a pipeline of two separate…