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Research software is crucial in the research process and the growth of Open Science underscores the importance of accessing research artifacts, like data and code, raising traceability challenges among outputs. While it is a clear principle…

Software Engineering · Computer Science 2025-07-31 Domhnall Carlin , Austen Rainer

The value of structured scholarly knowledge for research and society at large is well understood, but producing scholarly knowledge (i.e., knowledge traditionally published in articles) in structured form remains a challenge. We propose an…

Digital Libraries · Computer Science 2023-12-06 Muhammad Haris , Sören Auer , Markus Stocker

The ability to cite software and give credit to its authors and contributors is increasingly important. While the number of online open-source software repositories has grown rapidly over the past few years, few are being properly cited…

Databases · Computer Science 2021-02-05 Leshang Chen , Susan Davidson

Knowledge about the software used in scientific investigations is necessary for different reasons, including provenance of the results, measuring software impact to attribute developers, and bibliometric software citation analysis in…

Information Retrieval · Computer Science 2021-08-30 David Schindler , Benjamin Zapilko , Frank Krüger

With the advent of open source software, a veritable treasure trove of previously proprietary software development data was made available. This opened the field of empirical software engineering research to anyone in academia. Data that is…

Software Engineering · Computer Science 2022-04-19 Adam Tutko , Austin Z. Henley , Audris Mockus

Software is foundationally important to scientific and social progress, however, traditional acknowledgment of the use of others' work has not adapted in step with the rapid development and use of software in research. This report outlines…

Digital Libraries · Computer Science 2023-02-16 Daina Bouquin , Ana Trisovic , Oliver Bertuch , Elena Colón-Marrero

Under the data-driven research paradigm, research software has come to play crucial roles in nearly every stage of scientific inquiry. Scholars are advocating for the formal citation of software in academic publications, treating it on par…

Digital Libraries · Computer Science 2023-07-19 Yuzhuo Wang , Kai Li

A plethora of scientific software packages are published in repositories, e.g., Zenodo and figshare. These software packages are crucial for the reproducibility of published research. As an additional route to scholarly knowledge graph…

Digital Libraries · Computer Science 2022-12-16 Muhammad Haris , Markus Stocker , Sören Auer

Software citation contributes to achieving software sustainability in two ways: It provides an impact metric to incentivize stakeholders to make software sustainable. It also provides references to software used in research, which can be…

Software Engineering · Computer Science 2021-05-18 Stephan Druskat , Daniel S. Katz , Ilian T. Todorov

GitHub hosts hundreds of millions of code repositories written in hundreds of different programming languages. In addition to its hosting services, GitHub provides data and insights into code, such as vulnerability analysis and code…

Software Engineering · Computer Science 2022-06-22 Patrick Thomson , Rob Rix , Nicolas Wu , Tom Schrijvers

Outdated documentation is a pervasive problem in software development, preventing effective use of software, and misleading users and developers alike. We posit that one possible reason why documentation becomes out of sync so easily is…

Software Engineering · Computer Science 2022-12-06 Wen Siang Tan , Markus Wagner , Christoph Treude

In today's data-driven research landscape, dataset visibility and accessibility play a crucial role in advancing scientific knowledge. At the same time, data citation is essential for maintaining academic integrity, acknowledging…

Digital Libraries · Computer Science 2025-06-23 Fakhri Momeni , Janete Saldanha Bach , Brigitte Mathiak , Peter Mutschke

GitHub introduced the suggestion feature to enable reviewers to explicitly suggest code modifications in pull requests. These suggestions make the reviewers' feedback more actionable for the submitters and represent a valuable knowledge for…

Software Engineering · Computer Science 2025-02-10 Abir Bouraffa , Yen Dieu Pham , Walid Maalej

In many academic disciplines, software is created during the research process or for a research purpose. The crucial role of software for research is increasingly acknowledged. The application of software engineering to research software…

Software Engineering · Computer Science 2025-12-02 Stephan Druskat , Lars Grunske

Recently, automatic code comment generation is proposed to facilitate program comprehension. Existing code comment generation techniques focus on describing the functionality of the source code. However, there are other aspects such as…

Software Engineering · Computer Science 2018-07-09 Mohammad Masudur Rahman , Chanchal K. Roy , Iman Keivanloo

AI-based code review tools automatically review and comment on pull requests to improve code quality. Despite their growing presence, little is known about their actual impact. We present a large-scale empirical study of 16 popular AI-based…

Software Engineering · Computer Science 2026-04-28 Kexin Sun , Hongyu Kuang , Sebastian Baltes , Xin Zhou , He Zhang , Xiaoxing Ma , Guoping Rong , Dong Shao , Christoph Treude

Comments are an important part of the source code and are a primary source of documentation. This has driven interest in using large bodies of comments to train or evaluate tools that consume or produce them -- such as generating oracles or…

Software Engineering · Computer Science 2022-08-30 Sergey Matskevich , Colin S. Gordon

Academic citation and social attention measure different dimensions of the impact of research results. Both measures do not correlate with each other, and they are influenced by many factors. Among these factors are the field of research,…

Digital Libraries · Computer Science 2022-06-16 Pablo Dorta-González , María Isabel Dorta-González

The definition of scholarly content has expanded to include the data and source code that contribute to a publication. While major archiving efforts to preserve conventional scholarly content, typically in PDFs (e.g., LOCKSS, CLOCKSS,…

Digital Libraries · Computer Science 2022-08-10 Emily Escamilla , Martin Klein , Talya Cooper , Vicky Rampin , Michele C. Weigle , Michael L. Nelson

As an integral part of source code files, code comments help improve program readability and comprehension. However, developers sometimes do not comment on their program code adequately due to the incurred extra efforts, lack of relevant…

Software Engineering · Computer Science 2019-07-31 Xiaotao Song , Hailong Sun , Xu Wang , Jiafei Yan