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The conformational properties of linear alkanes, C$_n$H$_{2n+2}$, have been of intense interest for many years. Experiments and corresponding electronic structure calculations were first reported in the mid-2000s and continue to the present…

Chemical Physics · Physics 2025-09-24 Chen Qu , Thomas C. Allison , Apurba Nandi , Paul L. Houston , Qi Yu , Riccardo Conte , Joel M. Bowman

We show that efficient norm-conserving pseudopotentials for electronic structure calculations can be obtained from a polynomial Ansatz for the potential. Our pseudopotential is a polynomial of degree ten in the radial variable and fulfills…

Materials Science · Physics 2018-06-29 Martin Kiffner , Dieter Jaksch , Davide Ceresoli

Polynomial interpolation is an important component of many computational problems. In several of these computational problems, failure to preserve positivity when using polynomials to approximate or map data values between meshes can lead…

Numerical Analysis · Mathematics 2025-05-01 Timbwaoga A. J. Ouermi , Robert M Kirby , Martin Berzins

Machine learning interatomic potentials (MLIPs) provide an effective approach for accurately and efficiently modeling atomic interactions, expanding the capabilities of atomistic simulations to complex systems. However, a priori feature…

Computational Physics · Physics 2026-04-22 Tina Torabi , Matthias Militzer , Michael P. Friedlander , Christoph Ortner

We explore different ways to simplify the evaluation of the smooth overlap of atomic positions (SOAP) many-body atomic descriptor [Bart\'{o}k et al., Phys. Rev. B 87, 184115 (2013)]. Our aim is to improve the computational efficiency of…

Computational Physics · Physics 2019-09-16 Miguel A. Caro

Machine learning interatomic potentials (MLIPs) enable the accurate simulation of materials at larger sizes and time scales, and play increasingly important roles in the computational understanding and design of materials. However, MLIPs…

Materials Science · Physics 2023-07-27 Ji Qi , Tsz Wai Ko , Brandon C. Wood , Tuan Anh Pham , Shyue Ping Ong

We introduce a new class of machine learning interatomic potentials - fast General Two- and Three-body Potential (GTTP), which is as fast as conventional empirical potentials and require computational time that remains constant with…

Computational Physics · Physics 2023-01-03 Sergey Pozdnyakov , Artem R. Oganov , Efim Mazhnik , Arslan Mazitov , Ivan Kruglov

Machine-learned interatomic potentials (MILPs) are rapidly gaining interest for molecular modeling, as they provide a balance between quantum-mechanical level descriptions of atomic interactions and reasonable computational efficiency.…

Computational Physics · Physics 2024-08-30 Gustavo R. Pérez-Lemus , Yinan Xu , Yezhi Jin , Pablo F. Zubieta Rico , Juan J. de Pablo

In this paper we present methods for the synthesis of polynomial invariants for probabilistic transition systems. Our approach is based on martingale theory. We construct invariants in the form of polynomials over program variables, which…

Logic in Computer Science · Computer Science 2019-10-29 Anne Schreuder , C. -H. Luke Ong

We describe a new, generally applicable strategy for the systematic construction of basis invariants (BIs). Our method allows one to count the number of mutually independent BIs and gives controlled access to the interrelations (syzygies)…

High Energy Physics - Phenomenology · Physics 2020-09-18 Andreas Trautner

The operation of large-scale infrastructure networks requires scalable optimization schemes. To guarantee safe system operation, a high degree of feasibility in a small number of iterations is important. Decomposition schemes can help to…

Systems and Control · Electrical Eng. & Systems 2024-12-02 Alexander Engelmann , Sungho Shin , François Pacaud , Victor M. Zavala

Machine-learning interatomic potentials (MLIPs) have made a significant contribution to the recent progress in the fields of computational materials and chemistry due to the MLIPs' ability of accurately approximating energy landscapes of…

Computational Physics · Physics 2024-09-20 Max Hodapp , Alexander Shapeev

We present parameter-interpolated dynamic mode decomposition (piDMD), a parametric reduced-order modeling framework that embeds known parameter-affine structure directly into the DMD regression step. Unlike existing parametric DMD methods…

Systems and Control · Electrical Eng. & Systems 2026-04-15 Ananda Chakrabarti , Haitham H. Saleh , Indranil Nayak , Balasubramaniam Shanker , Fernando L. Teixeira , Debdipta Goswami

Polynomials are common algebraic structures, which are often used to approximate functions including probability distributions. This paper proposes to directly define polynomial distributions in order to describe stochastic properties of…

Information Theory · Computer Science 2022-12-12 Yue Yu , Pavel Loskot

Machine learning interatomic potentials (MLIPs) based on a large dataset obtained by density functional theory (DFT) calculation have been developed recently. This study gives both conceptual and practical bases for the high accuracy of…

Materials Science · Physics 2017-11-08 Akira Takahashi , Atsuto Seko , Isao Tanaka

We introduce adaptive-basis physics-informed neural networks (AB-PINNs), a novel approach to domain decomposition for training PINNs in which existing subdomains dynamically adapt to the intrinsic features of the unknown solution. Drawing…

Machine Learning · Computer Science 2025-10-13 Jonah Botvinick-Greenhouse , Wael H. Ali , Mouhacine Benosman , Saviz Mowlavi

We propose a simple scheme to construct composition-dependent interatomic potentials for multicomponent systems that when superposed onto the potentials for the pure elements can reproduce not only the heat of mixing of the solid solution…

Materials Science · Physics 2012-01-31 B. Sadigh , P. Erhart , A. Stukowski , A. Caro

This note considers the maximal positively invariant set for polynomial discrete time dynamics subject to constraints specified by a basic semialgebraic set. The note utilizes a relatively direct, but apparently overlooked, fact stating…

Dynamical Systems · Mathematics 2017-12-05 Saša V. Raković , Mario E. Villanueva

We present a computational scheme for predicting the ligands that bind to a pocket of known structure. It is based on the generation of a general abstract representation of the molecules, which is invariant to rotations, translations and…

Chemical Physics · Physics 2024-05-09 R. Beccaria , A. Lazzeri , G. Tiana

Admissible states in hyperbolic systems and related equations often form a convex invariant domain. Numerical violations of this domain can lead to loss of hyperbolicity, resulting in illposedness and severe numerical instabilities. It is…

Numerical Analysis · Mathematics 2025-12-11 Kailiang Wu , Xiangxiong Zhang , Chi-Wang Shu