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Graph encoder embedding, a recent technique for graph data, offers speed and scalability in producing vertex-level representations from binary graphs. In this paper, we extend the applicability of this method to a general graph model, which…

Machine Learning · Statistics 2024-10-24 Cencheng Shen

Graph neural networks (GNNs) are the dominant approach to solving machine learning problems defined over graphs. Despite much theoretical and empirical work in recent years, our understanding of finer-grained aspects of architectural design…

Machine Learning · Computer Science 2024-10-15 Dhruv Rohatgi , Tanya Marwah , Zachary Chase Lipton , Jianfeng Lu , Ankur Moitra , Andrej Risteski

In this paper, we propose a new type of graph, denoted as "embedded-graph", and its theory, which employs a distributed representation to describe the relations on the graph edges. Embedded-graphs can express linguistic and complicated…

Discrete Mathematics · Computer Science 2017-09-15 Atsushi Yokoyama

We consider a class of simple, non-trivial models of evolving weighted scale-free networks. The network evolution in these models is determined by attachment of new vertices to ends of preferentially chosen weighted edges. Resulting…

Statistical Mechanics · Physics 2007-05-23 S. N. Dorogovtsev , J. F. F. Mendes

We propose an empirical approach centered on the spectral dynamics of weights -- the behavior of singular values and vectors during optimization -- to unify and clarify several phenomena in deep learning. We identify a consistent bias in…

Signed networks are frequently observed in real life with additional sign information associated with each edge, yet such information has been largely ignored in existing network models. This paper develops a unified embedding model for…

Social and Information Networks · Computer Science 2023-10-17 Haoran Zhang , Junhui Wang

We study methods to manipulate weights in stress-graph embeddings to improve convex straight-line planar drawings of 3-connected planar graphs. Stress-graph embeddings are weighted versions of Tutte embeddings, where solving a linear system…

Computational Geometry · Computer Science 2023-09-01 Alvin Chiu , David Eppstein , Michael T. Goodrich

Spectral algorithms leverage spectral regularization techniques to analyze and process data, providing a flexible framework for addressing supervised learning problems. To deepen our understanding of their performance in real-world…

Machine Learning · Statistics 2025-07-23 Jun Fan , Zheng-Chu Guo , Lei Shi

As the popularity of graph data increases, there is a growing need to count the occurrences of subgraph patterns of interest, for a variety of applications. Many graphs are massive in scale and also fully dynamic (with insertions and…

Databases · Computer Science 2022-11-15 Kaixin Wang , Cheng Long , Da Yan , Jie Zhang , H. V. Jagadish

Spectral algorithms are graph partitioning algorithms that partition a node set of a graph into groups by using a spectral embedding map. Clustering techniques based on the algorithms are referred to as spectral clustering and are widely…

Machine Learning · Computer Science 2021-09-08 Tomohiko Mizutani

We study a simple embedding technique based on a matrix of personalized PageRank vectors seeded on a random set of nodes. We show that the embedding produced by the element-wise logarithm of this matrix (1) are related to the spectral…

Social and Information Networks · Computer Science 2022-07-26 Disha Shur , Yufan Huang , David F. Gleich

In machine learning, graph embedding algorithms seek low-dimensional representations of the input network data, thereby allowing for downstream tasks on compressed encodings. Recently, within the framework of network renormalization,…

Physics and Society · Physics 2025-08-29 Riccardo Milocco , Fabian Jansen , Diego Garlaschelli

Node embeddings map graph vertices into low-dimensional Euclidean spaces while preserving structural information. They are central to tasks such as node classification, link prediction, and signal reconstruction. A key goal is to design…

Machine Learning · Computer Science 2026-02-18 Valentin de Bassompierre , Jean-Charles Delvenne , Laurent Jacques

Random graphs are more and more used for modeling real world networks such as evolutionary networks of proteins. For this purpose we look at two different models and analyze how properties like connectedness and degree distributions are…

Probability · Mathematics 2019-02-05 Klemens Taglieber , Uta Freiberg

Research on graph representation learning has received a lot of attention in recent years since many data in real-world applications come in form of graphs. High-dimensional graph data are often in irregular form, which makes them more…

Machine Learning · Computer Science 2020-06-03 Fenxiao Chen , Yuncheng Wang , Bin Wang , C. -C. Jay Kuo

Graph embedding methods are becoming increasingly popular in the machine learning community, where they are widely used for tasks such as node classification and link prediction. Embedding graphs in geometric spaces should aid the…

Existing network embedding approaches tackle the problem of learning low-dimensional node representations. However, networks can also be seen in the light of edges interlinking pairs of nodes. The broad goal of this paper is to introduce…

Social and Information Networks · Computer Science 2020-11-12 Giuseppe Pirrò

Training of neural networks can be reformulated in spectral space, by allowing eigenvalues and eigenvectors of the network to act as target of the optimization instead of the individual weights. Working in this setting, we show that the…

Disordered Systems and Neural Networks · Physics 2022-10-13 Lorenzo Buffoni , Enrico Civitelli , Lorenzo Giambagli , Lorenzo Chicchi , Duccio Fanelli

Network-structured data becomes ubiquitous in daily life and is growing at a rapid pace. It presents great challenges to feature engineering due to the high non-linearity and sparsity of the data. The local and global structure of the…

Machine Learning · Computer Science 2025-01-31 Xin Sun , Zenghui Song , Yongbo Yu , Junyu Dong , Claudia Plant , Christian Boehm

Current graph representation learning techniques use Graph Neural Networks (GNNs) to extract features from dataset embeddings. In this work, we examine the quality of these embeddings and assess how changing them can affect the accuracy of…

Machine Learning · Computer Science 2022-11-30 S. Purchase , A. Zhao , R. D. Mullins