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Matrix decompositions are ubiquitous in machine learning, including applications in dimensionality reduction, data compression and deep learning algorithms. Typical solutions for matrix decompositions have polynomial complexity which…

Machine Learning · Computer Science 2024-03-13 Łukasz Struski , Paweł Morkisz , Przemysław Spurek , Samuel Rodriguez Bernabeu , Tomasz Trzciński

In this work, we present the M4RIE library which implements efficient algorithms for linear algebra with dense matrices over GF(2^e) for 2 <= 2 <= 10. As the name of the library indicates, it makes heavy use of the M4RI library both…

Mathematical Software · Computer Science 2011-11-30 Martin R. Albrecht

Hierarchical matrices provide a highly memory-efficient way of storing dense linear operators arising, for example, from boundary element methods, particularly when stored in the H^2 format. In such data-sparse representations, iterative…

Numerical Analysis · Mathematics 2025-09-23 Sven Christophersen

Sparse matricized tensor times Khatri-Rao product (MTTKRP) is one of the most computationally expensive kernels in sparse tensor computations. This work focuses on optimizing the MTTKRP operation on GPUs, addressing both performance and…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-04-09 Israt Nisa , Jiajia Li , Aravind Sukumaran-Rajam , Richard Vuduc , P. Sadayappan

Sparse compiler is a promising solution for sparse tensor algebra optimization. In compiler implementation, reduction in sparse-dense hybrid algebra plays a key role in performance. Though GPU provides various reduction semantics that can…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-01-10 Genghan Zhang , Yuetong Zhao , Yanting Tao , Zhongming Yu , Guohao Dai , Sitao Huang , Yuan Wen , Pavlos Petoumenos , Yu Wang

We contribute a third-party survey of sparse matrix-vector (SpMV) product performance on industrial-strength, large matrices using: (1) The SpMV implementations in Intel MKL, the Trilinos project (Tpetra subpackage), the CUSPARSE library,…

Performance · Computer Science 2016-08-03 Max Grossman , Christopher Thiele , Mauricio Araya-Polo , Florian Frank , Faruk O. Alpak , Vivek Sarkar

Sparse matrix representations are ubiquitous in computational science and machine learning, leading to significant reductions in compute time, in comparison to dense representation, for problems that have local connectivity. The adoption of…

Machine Learning · Computer Science 2023-11-13 Nicolas Nytko , Ali Taghibakhshi , Tareq Uz Zaman , Scott MacLachlan , Luke N. Olson , Matt West

The multiplication of a sparse matrix with a dense vector (SpMV) is a key component in many numerical schemes and its performance is known to be severely limited by main memory access. Several numerical schemes require the multiplication of…

Numerical Analysis · Mathematics 2023-01-11 Christie L. Alappat , Georg Hager , Olaf Schenk , Gerhard Wellein

Graph Convolutional Networks (GCNs) are recently getting much attention in bioinformatics and chemoinformatics as a state-of-the-art machine learning approach with high accuracy. GCNs process convolutional operations along with graph…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-28 Yusuke Nagasaka , Akira Nukada , Ryosuke Kojima , Satoshi Matsuoka

Matrix diagonalization is almost always involved in computing the density matrix needed in quantum chemistry calculations. In the case of modest matrix sizes ($\lesssim$ 5000), performance of traditional dense diagonalization algorithms on…

Chemical Physics · Physics 2023-06-23 Joshua Finkelstein , Christian F. A. Negre , Jean-Luc Fattebert

The vision of super computer at every desk can be realized by powerful and highly parallel CPUs or GPUs or APUs. Graphics processors once specialized for the graphics applications only, are now used for the highly computational intensive…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-04-16 Chittampally Vasanth Raja , Srinivas Balasubramanian , Prakash S Raghavendra

The parallel simulation of Spiking Neural P systems is mainly based on a matrix representation, where the graph inherent to the neural model is encoded in an adjacency matrix. The simulation algorithm is based on a matrix-vector…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-09 Javier Hernández-Tello , Miguel Ángel Martínez-del-Amor , David Orellana-Martín , Francis George C. Cabarle

Matrix-matrix multiplication is a fundamental operation of great importance to scientific computing and, increasingly, machine learning. It is a simple enough concept to be introduced in a typical high school algebra course yet in practice…

Mathematical Software · Computer Science 2016-09-02 Jianyu Huang , Robert A. van de Geijn

Sparse matrix multiplication is an important component of linear algebra computations. Implementing sparse matrix multiplication on an associative processor (AP) enables high level of parallelism, where a row of one matrix is multiplied in…

Mathematical Software · Computer Science 2017-05-23 L. Yavits , A. Morad , R. Ginosar

Countless applications cast their computational core in terms of dense linear algebra operations. These operations can usually be implemented by combining the routines offered by standard linear algebra libraries such as BLAS and LAPACK,…

Performance · Computer Science 2014-10-01 Elmar Peise , Paolo Bientinesi

This paper presents a low-overhead optimizer for the ubiquitous sparse matrix-vector multiplication (SpMV) kernel. Architectural diversity among different processors together with structural diversity among different sparse matrices lead to…

Performance · Computer Science 2017-11-16 Athena Elafrou , Georgios Goumas , Nektarios Koziris

Sparse matrix-matrix multiplication (SpGEMM) is a critical operation in numerous fields, including scientific computing, graph analytics, and deep learning. These applications exploit the sparsity of matrices to reduce storage and…

Machine Learning · Computer Science 2024-08-30 Sanjali Yadav , Bahar Asgari

In cryptanalysis, solving the discrete logarithm problem (DLP) is key to assessing the security of many public-key cryptosystems. The index-calculus methods, that attack the DLP in multiplicative subgroups of finite fields, require solving…

Cryptography and Security · Computer Science 2014-12-05 Hamza Jeljeli

Matrix multiplication is the bedrock in Deep Learning inference application. When it comes to hardware acceleration on edge computing devices, matrix multiplication often takes up a great majority of the time. To achieve better performance…

Machine Learning · Computer Science 2021-10-12 Yuyang Zhang , Dik Hin Leung , Min Guo , Yijia Xiao , Haoyue Liu , Yunfei Li , Jiyuan Zhang , Guan Wang , Zhen Chen

Sparse matrix-vector multiplication (SpMV) is a crucial computing kernel with widespread applications in iterative algorithms. Over the past decades, research on SpMV optimization has made remarkable strides, giving rise to various…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-04-10 Jianhua Gao , Bingjie Liu , Weixing Ji , Hua Huang
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