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Many real-world problems can be formalized as predicting links in a partially observed network. Examples include Facebook friendship suggestions, consumer-product recommendations, and the identification of hidden interactions between actors…

Machine Learning · Computer Science 2020-02-05 Xi Chen , Bo Kang , Jefrey Lijffijt , Tijl De Bie

Recovering latent structure from count data has received considerable attention in network inference, particularly when one seeks both cross-group interactions and within-group similarity patterns in bipartite networks, which is widely used…

Machine Learning · Statistics 2026-04-27 Aoran Zhang , Tianyao Wei , Maria J. Guerrero , César A. Uribe

We show that the success of cooperation in an evolutionary prisoner's dilemma on a complex network can be predicted by a simple, quantitative network analysis using mean field parameters. The criterion is shown to be accurate on a wide…

Physics and Society · Physics 2009-08-27 Stephen Devlin , Thomas Treloar

Predicting links in complex networks has been one of the essential topics within the realm of data mining and science discovery over the past few years. This problem remains an attempt to identify future, deleted, and redundant links using…

Social and Information Networks · Computer Science 2021-05-21 Kamal Berahmand , Elahe Nasiri , Saman Forouzandeh , Yuefeng Li

Co-occurrence network inference algorithms have significantly advanced our understanding of microbiome communities. However, these algorithms typically analyze microbial associations within samples collected from a single environmental…

Machine Learning · Computer Science 2025-10-15 Daniel Agyapong , Briana H. Beatty , Peter G. Kennedy , Jane C. Marks , Toby D. Hocking

Link prediction (LP) is an important problem in network science and machine learning research. The state-of-the-art LP methods are usually evaluated in a uniform setup, ignoring several factors associated with the data and application…

Social and Information Networks · Computer Science 2025-07-21 Bhargavi Kalyani , A Rama Prasad Mathi , Niladri Sett

This article investigates and compares three approaches to link prediction in colaboration networks, namely, an ERGM (Exponential Random Graph Model; Robins et al. 2007), a GCN (Graph Convolutional Network; Kipf and Welling 2017), and a…

Applications · Statistics 2024-11-05 Juan Sosa , Diego Martínez , Nicolás Guerrero

Link recommendation, which recommends links to connect unlinked online social network users, is a fundamental social network analytics problem with ample business implications. Existing link recommendation methods tend to recommend similar…

Machine Learning · Computer Science 2022-10-19 Kexin Yin , Xiao Fang , Bintong Chen , Olivia Sheng

Link prediction is a paradigmatic problem in network science, which aims at estimating the existence likelihoods of nonobserved links, based on known topology. After a brief introduction of the standard problem and metrics of link…

Data Analysis, Statistics and Probability · Physics 2021-12-14 Tao Zhou

Multiplex networks allow us to study a variety of complex systems where nodes connect to each other in multiple ways, for example friend, family, and co-worker relations in social networks. Link prediction is the branch of network analysis…

Social and Information Networks · Computer Science 2020-08-20 Michele Coscia , Michael Szell

Network information mining is the study of the network topology, which answers a large number of application-based questions towards the structural evolution and the function of a real system. For example, the questions can be related to…

Physics and Society · Physics 2022-06-29 Yijun Ran , Tianyu Liu , Tao Jia , Xiao-Ke Xu

Networks play a central role in modern data analysis, enabling us to reason about systems by studying the relationships between their parts. Most often in network analysis, the edges are given. However, in many systems it is difficult or…

Machine Learning · Statistics 2014-02-06 Scott W. Linderman , Ryan P. Adams

Ecologists have long suspected that species are more likely to interact if their traits match in a particular way. For example, a pollination interaction may be more likely if the proportions of a bee's tongue fit a plant's flower shape.…

Populations and Evolution · Quantitative Biology 2019-11-05 Maximilian Pichler , Virginie Boreux , Alexandra-Maria Klein , Matthias Schleuning , Florian Hartig

Link prediction, which aims to forecast unseen connections in graphs, is a fundamental task in graph machine learning. Heuristic methods, leveraging a range of different pairwise measures such as common neighbors and shortest paths, often…

Machine Learning · Computer Science 2025-01-03 Li Ma , Haoyu Han , Juanhui Li , Harry Shomer , Hui Liu , Xiaofeng Gao , Jiliang Tang

Determining spatial distributions of species and communities are key objectives of ecology and conservation. Joint species distribution models use multi-species detection-nondetection data to estimate species and community distributions.…

Applications · Statistics 2022-12-15 Jeffrey W. Doser , Andrew O. Finley , Sudipto Banerjee

Identifying the rank of species in a social or ecological network is a difficult task, since the rank of each species is invariably determined by complex interactions stipulated with other species. Simply put, the rank of a species is a…

Statistical Mechanics · Physics 2023-08-03 Manuel Sebastian Mariani , Dario Mazzilli , Aurelio Patelli , Flaviano Morone

Complex systems are often characterized by distinct types of interactions between the same entities. These can be described as a multilayer network where each layer represents one type of interaction. These layers may be interdependent in…

Social and Information Networks · Computer Science 2018-08-21 Caterina De Bacco , Eleanor A. Power , Daniel B. Larremore , Cristopher Moore

Link prediction in complex networks has attracted considerable attention from interdisciplinary research communities, due to its ubiquitous applications in biological networks, social networks, transportation networks, telecommunication…

Social and Information Networks · Computer Science 2020-12-22 Ece C. Mutlu , Toktam A. Oghaz , Amirarsalan Rajabi , Ivan Garibay

Link prediction is a fundamental challenge in network science. Among various methods, local similarity indices are widely used for their high cost-performance. However, the performance is less robust: for some networks local indices are…

Social and Information Networks · Computer Science 2021-09-09 Yan-Li Lee , Tao Zhou

Many real networks that are inferred or collected from data are incomplete due to missing edges. Missing edges can be inherent to the dataset (Facebook friend links will never be complete) or the result of sampling (one may only have access…

Social and Information Networks · Computer Science 2016-09-28 Matthew Burgess , Eytan Adar , Michael Cafarella