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Graph embedding is a powerful method to represent graph neurological data (e.g., brain connectomes) in a low dimensional space for brain connectivity mapping, prediction and classification. However, existing embedding algorithms have two…

Computer Vision and Pattern Recognition · Computer Science 2020-09-25 Alin Banka , Inis Buzi , Islem Rekik

The ability to compute similarity scores between graphs based on metrics such as Graph Edit Distance (GED) is important in many real-world applications. Computing exact GED values is typically an NP-hard problem and traditional algorithms…

Machine Learning · Computer Science 2022-08-18 Haoyan Xu , Runjian Chen , Yueyang Wang , Ziheng Duan , Jie Feng

Graphs, such as social networks, word co-occurrence networks, and communication networks, occur naturally in various real-world applications. Analyzing them yields insight into the structure of society, language, and different patterns of…

Social and Information Networks · Computer Science 2019-08-22 Palash Goyal , Emilio Ferrara

The recent proliferation of publicly available graph-structured data has sparked an interest in machine learning algorithms for graph data. Since most traditional machine learning algorithms assume data to be tabular, embedding algorithms…

Machine Learning · Computer Science 2019-08-09 Sourav Mukherjee , Tim Oates , Ryan Wright

Given a graph G and the desired size k in bits, how can we summarize G within k bits, while minimizing the information loss? Large-scale graphs have become omnipresent, posing considerable computational challenges. Analyzing such large…

Databases · Computer Science 2021-02-23 Kyuhan Lee , Hyeonsoo Jo , Jihoon Ko , Sungsu Lim , Kijung Shin

Embedding graphs in continous spaces is a key factor in designing and developing algorithms for automatic information extraction to be applied in diverse tasks (e.g., learning, inferring, predicting). The reliability of graph embeddings…

Machine Learning · Computer Science 2023-11-30 Andrea Marinoni , Pietro Lio' , Alessandro Barp , Christian Jutten , Mark Girolami

Graph embeddings map graph nodes to continuous vectors and are foundational to community detection, recommendation, and many scientific applications. At billion-scale, however, existing graph embedding systems face a trade-off: they either…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-03-13 Zhonggen Li , Xiangyu Ke , Yifan Zhu , Yunjun Gao , Feifei Li

Modern data analysis pipelines are becoming increasingly complex due to the presence of multi-view information sources. While graphs are effective in modeling complex relationships, in many scenarios a single graph is rarely sufficient to…

Machine Learning · Statistics 2019-04-02 Uday Shankar Shanthamallu , Jayaraman J. Thiagarajan , Huan Song , Andreas Spanias

Recent advances in representation learning on graphs, mainly leveraging graph convolutional networks, have brought a substantial improvement on many graph-based benchmark tasks. While novel approaches to learning node embeddings are highly…

Machine Learning · Statistics 2018-11-06 Cătălina Cangea , Petar Veličković , Nikola Jovanović , Thomas Kipf , Pietro Liò

We introduce a novel approach to graph-level representation learning, which is to embed an entire graph into a vector space where the embeddings of two graphs preserve their graph-graph proximity. Our approach, UGRAPHEMB, is a general…

Machine Learning · Computer Science 2019-06-04 Yunsheng Bai , Hao Ding , Yang Qiao , Agustin Marinovic , Ken Gu , Ting Chen , Yizhou Sun , Wei Wang

Network embedding has been intensively studied in the literature and widely used in various applications, such as link prediction and node classification. While previous work focus on the design of new algorithms or are tailored for various…

Social and Information Networks · Computer Science 2019-11-12 Wenqing Lin , Feng He , Faqiang Zhang , Xu Cheng , Hongyun Cai

Graphs are ubiquitous, and they can model unique characteristics and complex relations of real-life systems. Although using machine learning (ML) on graphs is promising, their raw representation is not suitable for ML algorithms. Graph…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-20 Amro Alabsi Aljundi , Taha Atahan Akyıldız , Kamer Kaya

What is the best way to match the nodes of two graphs? This graph alignment problem generalizes graph isomorphism and arises in applications from social network analysis to bioinformatics. Some solutions assume that auxiliary information on…

Information Retrieval · Computer Science 2021-06-14 Judith Hermanns , Anton Tsitsulin , Marina Munkhoeva , Alex Bronstein , Davide Mottin , Panagiotis Karras

Given a graph dataset, how can we augment it for accurate graph classification? Graph augmentation is an essential strategy to improve the performance of graph-based tasks, and has been widely utilized for analyzing web and social graphs.…

Machine Learning · Computer Science 2022-02-22 Jaemin Yoo , Sooyeon Shim , U Kang

Research on graph representation learning has received a lot of attention in recent years since many data in real-world applications come in form of graphs. High-dimensional graph data are often in irregular form, which makes them more…

Machine Learning · Computer Science 2020-06-03 Fenxiao Chen , Yuncheng Wang , Bin Wang , C. -C. Jay Kuo

Sampling methods (e.g., node-wise, layer-wise, or subgraph) has become an indispensable strategy to speed up training large-scale Graph Neural Networks (GNNs). However, existing sampling methods are mostly based on the graph structural…

Machine Learning · Computer Science 2021-09-07 Weilin Cong , Rana Forsati , Mahmut Kandemir , Mehrdad Mahdavi

A panoply of multi-view clustering algorithms has been developed to deal with prevalent multi-view data. Among them, spectral clustering-based methods have drawn much attention and demonstrated promising results recently. Despite progress,…

Machine Learning · Computer Science 2019-09-17 Zhao Kang , Guoxin Shi , Shudong Huang , Wenyu Chen , Xiaorong Pu , Joey Tianyi Zhou , Zenglin Xu

Network embedding techniques aim at representing structural properties of graphs in geometric space. Those representations are considered useful in downstream tasks such as link prediction and clustering. However, the number of graph…

Physics and Society · Physics 2021-11-03 Yi-Jiao Zhang , Kai-Cheng Yang , Filippo Radicchi

Graph representation learning aims to effectively encode high-dimensional sparse graph-structured data into low-dimensional dense vectors, which is a fundamental task that has been widely studied in a range of fields, including machine…

Performing statistical analyses on collections of graphs is of import to many disciplines, but principled, scalable methods for multi-sample graph inference are few. Here we describe an "omnibus" embedding in which multiple graphs on the…

Methodology · Statistics 2019-06-27 Keith Levin , Avanti Athreya , Minh Tang , Vince Lyzinski , Youngser Park , Carey E. Priebe