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Using high-resolution confocal rheometry, we study the shear profiles of well-entangled DNA solutions under large amplitude oscillatory shear (LAOS) in a rectilinear planar shear cell. With increasing Weissenberg number (Wi), we observe…

Soft Condensed Matter · Physics 2018-01-17 Seunghwan Shin , Kevin D. Dorfman , Xiang Cheng

The non-linear response of entangled polymers to shear flow is complicated. Its current understanding is framed mainly as a rheological description in terms of the complex viscosity. However, the full picture requires an assessment of the…

Computational Physics · Physics 2018-08-21 Airidas Korolkovas , Philipp Gutfreund , Max Wolff

Hydrodynamics provides a universal description of the emergent collective dynamics of vastly different many-body systems, based solely on their symmetries and conservation laws. Here we harness this universality, encoded in the…

Statistical Mechanics · Physics 2025-12-16 P. I. Hurtado , J. J. del Pozo , P. L. Garrido

We investigated the clogging behavior observed during the flow of aspherical particles from a silo in the presence of spherical particles of different sizes and proportions using flow visualization experiments and discrete element method…

Soft Condensed Matter · Physics 2024-07-03 Sukhada C. Bhure , Pankaj Doshi , Ashish V. Orpe

The crazing behavior of polymer nanocomposites formed by blending polymer grafted nanoparticles with an entangled polymer melt is studied by molecular dynamics simulations. We focus on the three key differences in the crazing behavior of a…

Soft Condensed Matter · Physics 2016-10-04 Dong Meng , Sanat K. Kumar , Ting Ge , Mark O. Robbins , Gary S. Grest

Buckling induced by viscous flow changes the shape of sheet-like nanomaterial particles suspended in liquids. This instability at the particle scale affects collective behavior of suspension flows and has many technological and biological…

Fluid Dynamics · Physics 2023-03-10 Hugo Perrin , Heng Li , Lorenzo Botto

The static and dynamic properties of dendrimers in semidilute solutions of linear chains of comparable size are investigated using Brownian dynamics simulations. The radius of gyration and diffusivity of a wide variety of low generation…

Soft Condensed Matter · Physics 2024-06-19 Silpa Mariya , Jeremy J. Barr , P. Sunthar , J. Ravi Prakash

A coarse grained model for flexible polymers end-grafted to repulsive spherical nanoparticles is studied for various chain lengths and grafting densities under good solvent conditions, by Molecular Dynamics methods and density functional…

Soft Condensed Matter · Physics 2015-05-18 Federica Lo Verso , Sergei A. Egorov , Andrey Milchev , Kurt Binder

Hydrodynamic interactions driven by particle activity are ubiquitous in active colloidal systems. Although these interactions are strongly influenced by the interfacial actuation mechanism and geometry of the swimming particles, theoretical…

Soft Condensed Matter · Physics 2025-06-17 Anson G. Thambi , William E. Uspal

Scaling relationships have been proposed to describe shear-driven size segregation based on intruder experiments and simulations. While these models have shown agreement with experimental and numerical results under uniform shear rate,…

Soft Condensed Matter · Physics 2025-07-03 Tianxiong Zhao , Daisuke Noto , Xia Li , Tomás Trewhela , Hugo N. Ulloa

Silent data corruptions (SDCs) hinder the correctness of long-running scientific applications on large scale computing systems. Selective particle replication (SPR) is proposed herein as the first particle-based replication method for…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-05-19 Aurélien Cavelan , Rubén M. Cabezón , Florina M. Ciorba

The structure and degree of order in soft matter and other materials is intimately connected to the nature of the interactions between the particles. One important research goal is to find suitable control mechanisms, to enhance or suppress…

Soft Condensed Matter · Physics 2020-09-16 A. Scacchi , M. G. Mazza , A. J. Archer

Spiking neural networks (SNN) provide a new computational paradigm capable of highly parallelized, real-time processing. Photonic devices are ideal for the design of high-bandwidth, parallel architectures matching the SNN computational…

Neural and Evolutionary Computing · Computer Science 2022-08-30 Luis El Srouji , Yun-Jhu Lee , Mehmet Berkay On , Li Zhang , S. J. Ben Yoo

The sampling of probability distributions specified up to a normalization constant is an important problem in both machine learning and statistical mechanics. While classical stochastic sampling methods such as Markov Chain Monte Carlo…

Machine Learning · Statistics 2020-10-27 Hao Wu , Jonas Köhler , Frank Noé

Non-monotonic retention profiles (NRP) have been observed in numerous studies of colloidal-nano flows in porous media. For the first time, we explain the phenomenon by distributed particle properties (size, shape, surface charge). We…

Soft Condensed Matter · Physics 2019-05-21 Gabriel Malgaresi , Ben Collins , Paul Alvaro , Pavel Bedrikovetsky

Patchy nanocubes are intriguing materials with simple shapes and space-filling and multidirectional bonding properties. Previous studies have revealed various mesoscopic structures such as colloidal crystals in the solid regime and rod-like…

Soft Condensed Matter · Physics 2024-07-09 Takahiro Ikeda , Yusei Kobayashi , Masashi Yamakawa

We examine the dynamics of two-dimensional colloidal systems using numerical simulations of a system with a drive applied to a thin region in the middle of the sample to produce a local shear. For a monodisperse colloidal assembly, we find…

Soft Condensed Matter · Physics 2015-06-11 A. Libal , B. M. Csiki , C. J. Olson Reichhardt , C. Reichhardt

In this work we will identify a novel relation between Smoothed Particle Hydrodynamics (SPH) and explicit Large Eddy Simulation (LES) using a coarse-graining method from Non-Equilibrium Molecular Dynamics (NEMD). While the current…

Fluid Dynamics · Physics 2022-11-24 Max Okraschevski , Niklas Bürkle , Rainer Koch , Hans-Jörg Bauer

Large scale simulations of two-dimensional bidisperse granular fluids allow us to determine spatial correlations of slow particles via the four-point structure factor $S_4(q,t)$. Both cases, elastic ($\varepsilon=1$) as well as inelastic…

Statistical Mechanics · Physics 2014-07-16 Karina E. Avila , Horacio E. Castillo , Andrea Fiege , Katharina Vollmayr-Lee , Annette Zippelius

While convective flows are implicated in many granular segregation processes, the associated particle-scale rearrangements are not well understood. A three-dimensional bidisperse mixture segregates under steady shear, but the cyclically…

Soft Condensed Matter · Physics 2013-08-19 Matt Harrington , Joost H. Weijs , Wolfgang Losert