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The tree inclusion problem is, given two node-labeled trees $P$ and $T$ (the ``pattern tree'' and the ``target tree''), to locate every minimal subtree in $T$ (if any) that can be obtained by applying a sequence of node insertion operations…

Data Structures and Algorithms · Computer Science 2021-06-16 Tatsuya Akutsu , Jesper Jansson , Ruiming Li , Atsuhiro Takasu , Takeyuki Tamura

Many algorithms have been developed for NP-hard problems on graphs with small treewidth $k$. For example, all problems that are expressable in linear extended monadic second order can be solved in linear time on graphs of bounded treewidth.…

Data Structures and Algorithms · Computer Science 2016-05-17 Frank Kammer , Torsten Tholey

The aim of this paper is to provide an affirmative answer to a recent question by Bubeck and Linial on the local profile of trees. For a tree $T$, let $p^{(k)}_1(T)$ be the proportion of paths among all $k$-vertex subtrees (induced…

Combinatorics · Mathematics 2016-02-16 Éva Czabarka , László A. Székely , Stephan Wagner

In this paper we present new data structures for two extensively studied variants of the orthogonal range searching problem. First, we describe a data structure that supports two-dimensional orthogonal range minima queries in $O(n)$ space…

Data Structures and Algorithms · Computer Science 2020-07-23 Yakov Nekrich

We consider the following problem: Preprocess a set $\mathcal{S}$ of $n$ axis-parallel boxes in $\mathbb{R}^d$ so that given a query of an axis-parallel box in $\mathbb{R}^d$, the pairs of boxes of $\mathcal{S}$ whose intersection…

Computational Geometry · Computer Science 2018-01-24 Eunjin Oh , Hee-Kap Ahn

Phylogenetic trees represent certain species and their likely ancestors. In such a tree, present-day species are leaves and an edge from u to v indicates that u is an ancestor of v. Weights on these edges indicate the phylogenetic distance.…

Populations and Evolution · Quantitative Biology 2025-10-08 Jannik Schestag

We introduce an improved structure of distance sensitivity oracle (DSO). The task is to pre-process a non-negatively weighted graph so that a data structure can quickly answer replacement path length for every triple of source, terminal and…

Data Structures and Algorithms · Computer Science 2016-05-17 Ran Duan , Tianyi Zhang

In this paper, we design a framework to obtain efficient algorithms for several problems with a global constraint (acyclicity or connectivity) such as Connected Dominating Set, Node Weighted Steiner Tree, Maximum Induced Tree, Longest…

Data Structures and Algorithms · Computer Science 2023-10-10 Benjamin Bergougnoux , Mamadou Moustapha Kanté

In this article, we study "questionable representations" of (partial or total) orders, introduced in our previous article "A class of orders with linear? time sorting algorithm". (Later, we consider arbitrary binary functional/relational…

Combinatorics · Mathematics 2020-02-24 Laurent Lyaudet

We develop new dynamically orthogonal tensor methods to approximate multivariate functions and the solution of high-dimensional time-dependent nonlinear partial differential equations (PDEs). The key idea relies on a hierarchical…

Numerical Analysis · Mathematics 2020-01-29 Alec Dektor , Daniele Venturi

We consider the following problem arising from the study of human problem solving: Let $G$ be a vertex-weighted graph with marked "in" and "out" vertices. Suppose a random walker begins at the in-vertex, steps to neighbors of vertices with…

Combinatorics · Mathematics 2009-05-28 Joshua N. Cooper

Under the word RAM model, we design three data structures that can be constructed in $O(n\sqrt{\lg n})$ time over $n$ points in an $n \times n$ grid. The first data structure is an $O(n\lg^{\epsilon} n)$-word structure supporting orthogonal…

Data Structures and Algorithms · Computer Science 2020-06-23 Younan Gao , Meng He , Yakov Nekrich

We examine the effect of network heterogeneity on the performance of quantum search algorithms. To this end, we study quantum search on a tree for the oracle Hamiltonian formulation employed by continuous-time quantum walks. We use…

Quantum Physics · Physics 2016-03-09 Pascal Philipp , Luís Tarrataca , Stefan Boettcher

Let $T$ be a tree space (or tree network) represented by a weighted tree with $t$ vertices, and $S$ be a set of $n$ stochastic points in $T$, each of which has a fixed location with an independent existence probability. We investigate two…

Computational Geometry · Computer Science 2016-12-16 Jie Xue , Yuan Li

We study the following range searching problem in high-dimensional Euclidean spaces: given a finite set $P\subset \mathbb{R}^d$, where each $p\in P$ is assigned a weight $w_p$, and radius $r>0$, we need to preprocess $P$ into a data…

Computational Geometry · Computer Science 2026-03-13 Andreas Kalavas , Ioannis Psarros

Point location problems for $n$ points in $d$-dimensional Euclidean space (and $\ell_p$ spaces more generally) have typically had two kinds of running-time solutions: * (Nearly-Linear) less than $d^{poly(d)} \cdot n \log^{O(d)} n$ time, or…

Computational Geometry · Computer Science 2018-02-01 Ryan Williams

Working in combinatorial model $\mathrm{W_{co}}(d)$, $d=1,2,\dots$, of P\'olya's random walker in $\mathbb{Z}^d$, we prove two theorems on recurrence to a vertex. We obtain an effective version of the first theorem if $d=2$. Using a…

Probability · Mathematics 2025-05-29 Martin Klazar , Richard Horský

We generalize the results from [X.-D. Zhang, X.-P. Lv, Y.-H. Chen, \textit{Ordering trees by the Laplacian coefficients}, Linear Algebra Appl. (2009), doi:10.1016/j.laa.2009.04.018] on the partial ordering of trees with given diameter. For…

Combinatorics · Mathematics 2015-03-19 Aleksandar Ili\' c

We present here a new and universal approach for the study of random and/or trees, unifying in one framework many different models, including some novel ones not yet understood in the literature. An and/or tree is a Boolean expression…

Probability · Mathematics 2017-06-09 Nicolas Broutin , Cécile Mailler

In biology, a phylogenetic tree is a tool to represent the evolutionary relationship between species. Unfortunately, the classical Schr\"oder tree model is not adapted to take into account the chronology between the branching nodes. In…

Data Structures and Algorithms · Computer Science 2019-01-15 Olivier Bodini , Antoine Genitrini , Mehdi Naima