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Topology based dimensionality reduction methods such as t-SNE and UMAP have seen increasing success and popularity in high-dimensional data. These methods have strong mathematical foundations and are based on the intuition that the topology…

Artificial Intelligence · Computer Science 2021-12-17 Ayush Dalmia , Suzanna Sia

Dimensionality reduction is crucial both for visualization and preprocessing high dimensional data for machine learning. We introduce a novel method based on a hierarchy built on 1-nearest neighbor graphs in the original space which is used…

Computer Vision and Pattern Recognition · Computer Science 2022-05-31 M. Saquib Sarfraz , Marios Koulakis , Constantin Seibold , Rainer Stiefelhagen

In this paper we propose a unified framework to simultaneously discover the number of clusters and group the data points into them using subspace clustering. Real data distributed in a high-dimensional space can be disentangled into a union…

Computer Vision and Pattern Recognition · Computer Science 2019-07-24 Jie Liang , Jufeng Yang , Ming-Ming Cheng , Paul L. Rosin , Liang Wang

UMAP (Uniform Manifold Approximation and Projection) is a novel manifold learning technique for dimension reduction. UMAP is constructed from a theoretical framework based in Riemannian geometry and algebraic topology. The result is a…

Machine Learning · Statistics 2020-09-21 Leland McInnes , John Healy , James Melville

We present a new method GTSNE to visualize high-dimensional data points in the two dimensional map. The technique is a variation of t-SNE that produces better visualizations by capturing both the local neighborhood structure and the macro…

Machine Learning · Computer Science 2021-08-04 Songting Shi

Dimensionality reduction (DR) techniques help analysts to understand patterns in high-dimensional spaces. These techniques, often represented by scatter plots, are employed in diverse science domains and facilitate similarity analysis among…

Machine Learning · Computer Science 2025-10-21 Wilson E. Marcílio-Jr , Danilo M. Eler , Fernando V. Paulovich , Rafael M. Martins

In this paper, we describe versions of triclustering algorithms adapted for efficient calculations in distributed environments with MapReduce model or parallelisation mechanism provided by modern programming languages. OAC-family of…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-27 Dmitry Egurnov , Dmitry I. Ignatov , Dmitry Tochilkin

Nonlinear dimensionality reduction methods have demonstrated top-notch performance in many pattern recognition and image classification tasks. Despite their popularity, they suffer from highly expensive time and memory requirements, which…

Computational Geometry · Computer Science 2014-04-08 Amir Najafi , Amir Joudaki , Emad Fatemizadeh

With the increasing availability of high-dimensional data, analysts often rely on exploratory data analysis to understand complex data sets. A key approach to exploring such data is dimensionality reduction, which embeds high-dimensional…

Machine Learning · Computer Science 2024-12-17 Pavlin G. Poličar , Blaž Zupan

This paper presents a comprehensive comparative analysis of prominent clustering algorithms K-means, DBSCAN, and Spectral Clustering on high-dimensional datasets. We introduce a novel evaluation framework that assesses clustering…

Machine Learning · Computer Science 2025-07-31 Vishnu Vardhan Baligodugula , Fathi Amsaad

Subspace clustering refers to the problem of clustering unlabeled high-dimensional data points into a union of low-dimensional linear subspaces, whose number, orientations, and dimensions are all unknown. In practice one may have access to…

Machine Learning · Statistics 2015-12-15 Reinhard Heckel , Michael Tschannen , Helmut Bölcskei

Misuses of t-SNE and UMAP in visual analytics have become increasingly common. For example, although t-SNE and UMAP projections often do not faithfully reflect the original distances between clusters, practitioners frequently use them to…

Human-Computer Interaction · Computer Science 2025-10-02 Hyeon Jeon , Jeongin Park , Sungbok Shin , Jinwook Seo

Dimensional data reduction methods are fundamental to explore and visualize large data sets. Basic requirements for unsupervised data exploration are simplicity, flexibility and scalability. However, current methods show complex…

Machine Learning · Computer Science 2021-12-03 Joan Garriga , Frederic Bartumeus

tSNE and UMAP are popular dimensionality reduction algorithms due to their speed and interpretable low-dimensional embeddings. Despite their popularity, however, little work has been done to study their full span of differences. We…

Nowadays, as data becomes increasingly complex and distributed, data analyses often involve several related datasets that are stored on different servers and probably owned by different stakeholders. While there is an emerging need to…

Cryptography and Security · Computer Science 2020-07-31 Jiazhi Xia , Tianxiang Chen , Lei Zhang , Wei Chen , Yang Chen , Xiaolong Zhang , Cong Xie , Tobias Schreck

Learning efficient representations of local features is a key challenge in feature volume-based 3D neural mapping, especially in large-scale environments. In this paper, we introduce Decomposition-based Neural Mapping (DNMap), a…

Computer Vision and Pattern Recognition · Computer Science 2024-07-23 Minseong Park , Suhan Woo , Euntai Kim

To solve deep metric learning problems and producing feature embeddings, current methodologies will commonly use a triplet model to minimise the relative distance between samples from the same class and maximise the relative distance…

Computer Vision and Pattern Recognition · Computer Science 2017-07-28 Ben Harwood , Vijay Kumar B G , Gustavo Carneiro , Ian Reid , Tom Drummond

We introduce Uniform Manifold Approximation with Two-phase Optimization (UMATO), a dimensionality reduction (DR) technique that improves UMAP to capture the global structure of high-dimensional data more accurately. In UMATO, optimization…

Machine Learning · Computer Science 2023-01-03 Hyeon Jeon , Hyung-Kwon Ko , Soohyun Lee , Jaemin Jo , Jinwook Seo

Due to the intrinsic complexity of high-dimensional (HD) data, dimensionality reduction (DR) techniques cannot preserve all the structural characteristics of the original data. Therefore, DR techniques focus on preserving either local…

Machine Learning · Computer Science 2025-11-18 Hyeon Jeon , Kwon Ko , Soohyun Lee , Jake Hyun , Taehyun Yang , Gyehun Go , Jaemin Jo , Jinwook Seo

Dimensionality reduction is often used as an initial step in data exploration, either as preprocessing for classification or regression or for visualization. Most dimensionality reduction techniques to date are unsupervised; they do not…

Machine Learning · Statistics 2020-06-17 Jake S. Rhodes , Adele Cutler , Guy Wolf , Kevin R. Moon