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This paper develops a molecular integrated sensing and communication (ISAC) framework that exploits the same molecular observations for physical-parameter sensing and data detection. As a representative instantiation, we consider a…

Signal Processing · Electrical Eng. & Systems 2026-05-05 Ruifeng Zheng , Pengjie Zhou , Martín Schottlender , Veronika Volkova , Juan A. Cabrera , Frank H. P. Fitzek , Pit Hofmann

In diffusion-based molecular communication, information is transferred from a transmitter to a receiver using molecular carriers. The low achievable data rate is the main disadvantage of diffusion-based molecular over radio-based…

Emerging Technologies · Computer Science 2018-09-18 Tayyebeh Jahani-Nezhad , Foroogh S. Tabataba

Molecular communication (MC) allows nanomachines to communicate and cooperate with each other in a fluid environment. The diffusion-based MC is popular but is easily constrained by the transmit distance due to the severe attenuation of…

Information Theory · Computer Science 2021-04-28 Shuo Yuan , Jiaxing Wang , Mugen Peng

The calculation of shortest-path distances in road networks is a core operation in navigation systems, location-based services, and spatial analytics. Although classical algorithms, e.g., Dijkstra's algorithm, provide exact answers, their…

Machine Learning · Computer Science 2026-02-05 Gautam Choudhary , Libin Zhou , Yeasir Rayhan , Walid G. Aref

Reliability estimation of Machine Learning (ML) models is becoming a crucial subject. This is particularly the case when such \mbox{models} are deployed in safety-critical applications, as the decisions based on model predictions can result…

Machine Learning · Computer Science 2022-06-23 Mohammed Naveed Akram , Akshatha Ambekar , Ioannis Sorokos , Koorosh Aslansefat , Daniel Schneider

Single-molecule tracking (SMT) methods are under considerable expansion in many fields of cell biology, as the dynamics of cellular components in biological mechanisms becomes increasingly relevant. Despite the development of SMT…

Quantitative Methods · Quantitative Biology 2015-06-08 Sylvain Tollis

Molecular dynamics (MD) simulations are powerful tools for elucidating the macroscopic physical properties of materials from microscopic atomic behaviors. However, the massive, high-dimensional datasets generated by MD simulations pose a…

Applications · Statistics 2026-03-19 Yusuke Ono , Takumi Sato , Kenji Yasuoka , Linyu Peng

In wireless communication systems, the use of multiple antennas at both the transmitter and receiver is a widely known method for improving both reliability and data rates, as it increases the former through transmit or receive diversity…

Information Theory · Computer Science 2014-12-31 Fathurrahman Hilman , Jong-Hyen Baek , Eun-Kyung Chae , KyungchunLee

In this paper, we present an analytical model for the diffusive molecular communication (MC) system with a reversible adsorption receiver in a fluid environment. The widely used concentration shift keying (CSK) is considered for modulation.…

Emerging Technologies · Computer Science 2016-06-23 Yansha Deng , Adam Noel , Maged Elkashlan , Arumugam Nallanathan , Karen C. Cheung

Molecular dynamics (MD) simulations are used in biochemistry, physics, and other fields to study the motions, thermodynamic properties, and the interactions between molecules. Computational limitations and the complexity of these problems,…

Numerical Analysis · Mathematics 2018-01-17 F. Grogan , M. Holst , L. Lindblom , R. Amaro

This paper investigates the channel impulse response (CIR), i.e., the molecule hitting rate, of a molecular communication (MC) system employing an absorbing receiver (RX) covered by multiple non overlapping receptors. In this system,…

Emerging Technologies · Computer Science 2022-04-29 Xinyu Huang , Yuting Fang , Stuart T. Johnston , Mattew Faria , Nan Yang , Robert Schober

Distance queries are a basic tool in data analysis. They are used for detection and localization of change for the purpose of anomaly detection, monitoring, or planning. Distance queries are particularly useful when data sets such as…

Data Structures and Algorithms · Computer Science 2015-03-20 Edith Cohen

In this paper, symbol-by-symbol maximum likelihood (ML) detection is proposed for a cooperative diffusion-based molecular communication (MC) system. In this system, a fusion center (FC) chooses the transmitter's symbol that is more likely,…

Information Theory · Computer Science 2018-09-06 Yuting Fang , Adam Noel , Nan Yang , Andrew W. Eckford , Rodney A. Kennedy

Molecular communication (MC) is a model of information transmission where the signal is transmitted by information-carrying molecules through their physical transport from a transmitter to a receiver through a communication channel. Prior…

Statistical Mechanics · Physics 2026-05-05 Phanindra Dewan , Sumantra Sarkar

In this paper, we consider a molecular diffusion based communications link that conveys information on the macro-scale (several metres). The motivation is to apply molecular-based communications to challenging electromagnetic environments.…

Networking and Internet Architecture · Computer Science 2016-11-18 Siyi Wang , Weisi Guo , Song Qiu , Mark D. McDonnell

This paper investigates the estimation of different parameters, e.g., propagation distance and flow velocity, by utilizing two fully-absorbing receivers (RXs) in a one-dimensional (1D) environment. The time-varying number of absorbed…

Emerging Technologies · Computer Science 2021-02-17 Xinyu Huang , Yuting Fang , Adam Noel , Nan Yang

The study of Molecular Communication(MC) is more and more prevalence, and channel model of MC plays an important role in the MC System. Since different propagation environment and modulation techniques produce different channel model, most…

Emerging Technologies · Computer Science 2016-03-14 Pengfei Lu , Yang You , Bo Liu , Zhenqiang Wu

Molecular Communications (MC) is a bio-inspired communication paradigm which uses molecules as information carriers, thereby requiring unconventional transmitter/receiver architectures and modulation/detection techniques. Practical MC…

Signal Processing · Electrical Eng. & Systems 2023-01-04 Meltem Civas , Ali Abdali , Murat Kuscu , Ozgur B. Akan

Shear viscosity, though being a fundamental property of all liquids, is computationally expensive to estimate from equilibrium molecular dynamics simulations. Recently, Machine Learning (ML) methods have been used to augment molecular…

We have extended the multilevel summation (MLS) method, originally developed to evaluate long-range Coulombic interactions in molecular dynamics (MD) simulations [Skeel et al., J. Comput. Chem., 23, 673 (2002)], to handle dispersion…

Materials Science · Physics 2014-01-16 Daniel Tameling , Paul Springer , Paolo Bientinesi , Ahmed E. Ismail