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A significant challenge in machine learning, particularly in noisy and low-data environments, lies in effectively incorporating inductive biases to enhance data efficiency and robustness. Despite the success of informed machine learning…

Machine Learning · Computer Science 2025-02-06 Katarzyna Kobalczyk , Mihaela van der Schaar

We propose a general framework to extract microscopic interactions from raw configurations with deep neural networks. The approach replaces the modeling Hamiltonian by the neural networks, in which the interaction is encoded. It can be…

Computational Physics · Physics 2020-08-19 Lingxiao Wang , Yin Jiang , Kai Zhou

The great learning ability of deep learning models facilitates us to comprehend the real physical world, making learning to simulate complicated particle systems a promising endeavour. However, the complex laws of the physical world pose…

Machine Learning · Computer Science 2025-08-26 Guangsi Shi , Daokun Zhang , Ming Jin , Shirui Pan , Philip S. Yu

Motivation: Molecular interaction networks summarize complex biological processes as graphs, whose structure is informative of biological function at multiple scales. Simultaneously, omics technologies measure the variation or activity of…

Quantitative Methods · Quantitative Biology 2020-12-24 Ramin Hasibi , Tom Michoel

Conventional Knowledge Graph Completion (KGC) assumes that all test entities appear during training. However, in real-world scenarios, Knowledge Graphs (KG) evolve fast with out-of-knowledge-graph (OOKG) entities added frequently, and we…

Computation and Language · Computer Science 2020-09-29 Damai Dai , Hua Zheng , Fuli Luo , Pengcheng Yang , Baobao Chang , Zhifang Sui

Oscillator Ising machines (OIMs) are networks of coupled oscillators that seek the minimum energy state of an Ising model. Since many NP-hard problems are equivalent to the minimization of an Ising Hamiltonian, OIMs have emerged as a…

Optimization and Control · Mathematics 2026-02-20 Ahmed Allibhoy , Arthur N. Montanari , Fabio Pasqualetti , Adilson E. Motter

The growing enforcement of the right to be forgotten regulations has propelled recent advances in certified (graph) unlearning strategies to comply with data removal requests from deployed machine learning (ML) models. Motivated by the…

Machine Learning · Computer Science 2025-05-22 O. Deniz Kose , Gonzalo Mateos , Yanning Shen

Graphs are a commonly used construct for representing relationships between elements in complex high dimensional datasets. Many real-world phenomenon are dynamic in nature, meaning that any graph used to represent them is inherently…

Social and Information Networks · Computer Science 2018-11-21 Stephen Bonner , John Brennan , Ibad Kureshi , Georgios Theodoropoulos , Andrew Stephen McGough , Boguslaw Obara

We develop inductive biases for the machine learning of complex physical systems based on the port-Hamiltonian formalism. To satisfy by construction the principles of thermodynamics in the learned physics (conservation of energy,…

Machine Learning · Computer Science 2023-03-28 Quercus Hernández , Alberto Badías , Francisco Chinesta , Elías Cueto

A recent line of work has shown that end-to-end optimization of Bayesian filters can be used to learn state estimators for systems whose underlying models are difficult to hand-design or tune, while retaining the core advantages of…

Robotics · Computer Science 2021-08-24 Brent Yi , Michelle A. Lee , Alina Kloss , Roberto Martín-Martín , Jeannette Bohg

Network systems have become a ubiquitous modeling tool in many areas of science where nodes in a graph represent distributed processes and edges between nodes represent a form of dynamic coupling. When a network topology is already known…

Adaptation and Self-Organizing Systems · Physics 2019-05-30 Donatello Materassi , Murti V. Salapaka

Topological metrics of graphs provide a natural way to describe the prominent features of various types of networks. Graph metrics describe the structure and interplay of graph edges and have found applications in many scientific fields. In…

Data Structures and Algorithms · Computer Science 2018-06-21 Loukianos Spyrou , Javier Escudero

We train an agent to navigate in 3D environments using a hierarchical strategy including a high-level graph based planner and a local policy. Our main contribution is a data driven learning based approach for planning under uncertainty in…

Machine Learning · Computer Science 2020-07-13 Edward Beeching , Jilles Dibangoye , Olivier Simonin , Christian Wolf

Graph Laplacian learning, also known as network topology inference, is a problem of great interest to multiple communities. In Gaussian graphical models (GM), graph learning amounts to endowing covariance selection with the Laplacian…

Machine Learning · Computer Science 2024-02-14 Changhao Shi , Gal Mishne

Recent developments in Machine Learning approaches for modelling physical systems have begun to mirror the past development of numerical methods in the computational sciences. In this survey, we begin by providing an example of this with…

Machine Learning · Computer Science 2023-04-04 Artur P. Toshev , Ludger Paehler , Andrea Panizza , Nikolaus A. Adams

As deep learning becomes more prevalent for prediction and control of real physical systems, it is important that these overparameterized models are consistent with physically plausible dynamics. This elicits a problem with how much…

Machine Learning · Computer Science 2021-06-08 Aaron Havens , Girish Chowdhary

Graph neural network models have been extensively used to learn node representations for graph structured data in an end-to-end setting. These models often rely on localized first order approximations of spectral graph convolutions and…

Machine Learning · Computer Science 2020-10-20 Mohammed Haroon Dupty , Wee Sun Lee

Probabilistic graphical models are powerful tools which allow us to formalise our knowledge about the world and reason about its inherent uncertainty. There exist a considerable number of methods for performing inference in probabilistic…

Artificial Intelligence · Computer Science 2018-11-13 Robert Walecki , Albert Buchard , Kostis Gourgoulias , Chris Hart , Maria Lomeli , A. K. W. Navarro , Max Zwiessele , Yura Perov , Saurabh Johri

Estimating extensive combinations of local parameters in distributed quantum systems is a central problem in quantum sensing, with applications ranging from magnetometry to timekeeping. While optimal strategies are known for sensing…

Accurate long-range prediction of geophysical systems is difficult due to strongly nonlinear dynamics, the high computational cost of full-physics simulations, and the error accumulation that arise when one-step autoregressive surrogates…

Machine Learning · Computer Science 2026-05-29 Zesheng Liu , Maryam Rahnemoonfar