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Understanding how the brain responds to sensory inputs is challenging: brain recordings are partial, noisy, and high dimensional; they vary across sessions and subjects and they capture highly nonlinear dynamics. These challenges have led…

Neurons and Cognition · Quantitative Biology 2022-10-03 Omar Chehab , Alexandre Defossez , Jean-Christophe Loiseau , Alexandre Gramfort , Jean-Remi King

Functional Magnetic Resonance Imaging (fMRI) is a primary modality for studying brain activity. Modeling spatial dependence of imaging data at different scales is one of the main challenges of contemporary neuroimaging, and it could allow…

Applications · Statistics 2016-06-16 Stefano Castruccio , Hernando Ombao , Marc G. Genton

We present a foundation model for brain MRI that can work with different combinations of imaging sequences. The model uses one encoder with learnable modality embeddings, conditional layer normalization, and a masked autoencoding objective…

Computer Vision and Pattern Recognition · Computer Science 2025-11-06 Minh Sao Khue Luu , Bair N. Tuchinov

In-context reinforcement learning (ICRL) has emerged as a promising paradigm for adapting RL agents to downstream tasks through prompt conditioning. However, two notable challenges remain in fully harnessing in-context learning within RL…

Machine Learning · Computer Science 2025-10-29 Wenhao Wu , Fuhong Liu , Haoru Li , Zican Hu , Daoyi Dong , Chunlin Chen , Zhi Wang

The Algonauts 2025 Challenge called on the community to develop encoding models that predict whole-brain fMRI responses to naturalistic multimodal movies. In this submission, we propose a sequence-to-sequence Transformer that…

Computer Vision and Pattern Recognition · Computer Science 2025-07-28 Qianyi He , Yuan Chang Leong

Mixture of Experts (MoE) offers remarkable performance and computational efficiency by selectively activating subsets of model parameters. Traditionally, MoE models use homogeneous experts, each with identical capacity. However, varying…

Computation and Language · Computer Science 2024-08-21 An Wang , Xingwu Sun , Ruobing Xie , Shuaipeng Li , Jiaqi Zhu , Zhen Yang , Pinxue Zhao , J. N. Han , Zhanhui Kang , Di Wang , Naoaki Okazaki , Cheng-zhong Xu

Brain activation and connectivity analyses in task-based functional magnetic resonance imaging (fMRI) experiments with multiple subjects are currently at the forefront of data-driven neuroscience. In such experiments, interest often lies in…

Applications · Statistics 2019-04-02 Daniel Spencer , Rajarshi Guhaniyogi , Raquel Prado

Research efforts for visual decoding from fMRI signals have attracted considerable attention in research community. Still multi-subject fMRI decoding with one model has been considered intractable due to the drastic variations in fMRI…

Computer Vision and Pattern Recognition · Computer Science 2024-10-08 Inhwa Han , Jaayeon Lee , Jong Chul Ye

Due to the low signal-to-noise ratio and limited resolution of functional MRI data, and the high complexity of natural images, reconstructing a visual stimulus from human brain fMRI measurements is a challenging task. In this work, we…

Computer Vision and Pattern Recognition · Computer Science 2023-03-07 Zijin Gu , Keith Jamison , Amy Kuceyeski , Mert Sabuncu

An increasing number of LLMs employ Mixture-of-Experts (MoE) architectures where the feed-forward layer is replaced by a pool of experts and each token only activates a small subset of them. During autoregressive generation, these models…

Machine Learning · Computer Science 2025-11-05 Costin-Andrei Oncescu , Qingyang Wu , Wai Tong Chung , Robert Wu , Bryan Gopal , Junxiong Wang , Tri Dao , Ben Athiwaratkun

Current AI frameworks for brain decoding and encoding, typically train and test models within the same datasets. This limits their utility for brain computer interfaces (BCI) or neurofeedback, for which it would be useful to pool…

In the past five years, the use of generative and foundational AI systems has greatly improved the decoding of brain activity. Visual perception, in particular, can now be decoded from functional Magnetic Resonance Imaging (fMRI) with…

Image and Video Processing · Electrical Eng. & Systems 2024-03-15 Yohann Benchetrit , Hubert Banville , Jean-Rémi King

Decoding stimulus images from fMRI signals has advanced with pre-trained generative models. However, existing methods struggle with cross-subject mappings due to cognitive variability and subject-specific differences. This challenge arises…

Computer Vision and Pattern Recognition · Computer Science 2025-07-28 Yangyang Xu , Bangzhen Liu , Wenqi Shao , Yong Du , Shengfeng He , Tingting Zhu

Neural encoding and decoding, which aim to characterize the relationship between stimuli and brain activities, have emerged as an important area in cognitive neuroscience. Traditional encoding models, which focus on feature extraction and…

Neurons and Cognition · Quantitative Biology 2019-08-26 Hao Wu , Ziyu Zhu , Jiayi Wang , Nanning Zheng , Badong Chen

Multimodal emotion understanding requires effective integration of text, audio, and visual modalities for both discrete emotion recognition and continuous sentiment analysis. We present EGMF, a unified framework combining expert-guided…

Computation and Language · Computer Science 2026-01-13 Jiaqi Qiao , Xiujuan Xu , Xinran Li , Yu Liu

In this work, we first explore whether the parameters activated by the MoE layer remain highly sparse at inference. We perform a sparsification study on several representative MoE models. For each expert, we rank parameters by the magnitude…

Computation and Language · Computer Science 2025-10-08 Runxi Cheng , Yuchen Guan , Yucheng Ding , Qingguo Hu , Yongxian Wei , Chun Yuan , Yelong Shen , Weizhu Chen , Yeyun Gong

Multi-task learning (MTL) enables the efficient transfer of extra knowledge acquired from other tasks. The high correlation between multimodal sentiment analysis (MSA) and multimodal emotion recognition (MER) supports their joint training.…

Artificial Intelligence · Computer Science 2025-05-21 Shuo Zhang , Jinsong Zhang , Zhejun Zhang , Lei Li

Mixture-of-experts based models, which use language experts to extract language-specific representations effectively, have been well applied in code-switching automatic speech recognition. However, there is still substantial space to…

Sound · Computer Science 2023-10-10 Peikun Chen , Fan Yu , Yuhao Lian , Hongfei Xue , Xucheng Wan , Naijun Zheng , Huan Zhou , Lei Xie

Brain decoding is a key neuroscience field that reconstructs the visual stimuli from brain activity with fMRI, which helps illuminate how the brain represents the world. fMRI-to-image reconstruction has achieved impressive progress by…

Neurons and Cognition · Quantitative Biology 2025-10-27 Guoying Sun , Weiyu Guo , Tong Shao , Yang Yang , Haijin Zeng , Jie Liu , Jingyong Su

Modern applications increasingly involve many heterogeneous input streams, such as clinical sensors, wearable device data, imaging, and text, each with distinct measurement models, sampling rates, and noise characteristics. We define this…

Machine Learning · Computer Science 2026-03-03 Xing Han , Hsing-Huan Chung , Joydeep Ghosh , Paul Pu Liang , Suchi Saria
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