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Recently there has been an increasing trend to use deep learning frameworks for both 2D consumer images and for 3D medical images. However, there has been little effort to use deep frameworks for volumetric vascular segmentation. We wanted…

Computer Vision and Pattern Recognition · Computer Science 2016-06-09 Petteri Teikari , Marc Santos , Charissa Poon , Kullervo Hynynen

Purpose: To develop and evaluate an end-to-end deep learning pipeline for segmentation and analysis of cardiac magnetic resonance images to provide core-lab processing for a multi-centre registry of Fontan patients. Materials and Methods:…

Segmentation and measurement of cardiac chambers is critical in cardiac ultrasound but is laborious and poorly reproducible. Neural networks can assist, but supervised approaches require the same laborious manual annotations. We built a…

Image and Video Processing · Electrical Eng. & Systems 2026-02-24 Danielle L. Ferreira , Connor Lau , Zaynaf Salaymang , Rima Arnaout

We recently published a deep learning study on the potential of encoder-decoder networks for the segmentation of the 2D CAMUS ultrasound dataset. We propose in this abstract an extension of the evaluation criteria to anatomical assessment,…

Purpose: Segmentation of the breast region in dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) is essential for the automatic measurement of breast density and the quantitative analysis of imaging findings. This study aims to…

Image and Video Processing · Electrical Eng. & Systems 2024-10-04 Sam Narimani , Solveig Roth Hoff , Kathinka Dæhli Kurz , Kjell-Inge Gjesdal , Jurgen Geisler , Endre Grovik

Segmentation has been a major task in neuroimaging. A large number of automated methods have been developed for segmenting healthy and diseased brain tissues. In recent years, deep learning techniques have attracted a lot of attention as a…

Image and Video Processing · Electrical Eng. & Systems 2019-07-05 Jimit Doshi , Guray Erus , Mohamad Habes , Christos Davatzikos

Differentiable programming is able to combine different functions or programs in a processing pipeline with the goal of applying end-to-end learning or optimization. A significant impediment is the non-differentiable nature of some…

Computer Vision and Pattern Recognition · Computer Science 2019-05-07 Nhat M. Nguyen , Nilanjan Ray

The goal of this work is to identify the best optimizers for deep learning in the context of cardiac image segmentation and to provide guidance on how to design segmentation networks with effective optimization strategies. Adaptive learning…

Image and Video Processing · Electrical Eng. & Systems 2023-02-07 Aliasghar Mortazi , Vedat Cicek , Elif Keles , Ulas Bagci

Cardiac segmentation is in great demand for clinical practice. Due to the enormous labor of manual delineation, unsupervised segmentation is desired. The ill-posed optimization problem of this task is inherently challenging, requiring…

Image and Video Processing · Electrical Eng. & Systems 2023-01-18 Sihan Wang , Fuping Wu , Lei Li , Zheyao Gao , Byung-Woo Hong , Xiahai Zhuang

Non-invasive and cost effective in nature, the echocardiogram allows for a comprehensive assessment of the cardiac musculature and valves. Despite progressive improvements over the decades, the rich temporally resolved data in…

Deep learning models usually require sufficient training data to achieve high accuracy, but obtaining labeled data can be time-consuming and labor-intensive. Here we introduce a template-based training method to train a 3D U-Net model from…

Image and Video Processing · Electrical Eng. & Systems 2023-08-07 Fang-Cheng Yeh

Left ventricular segmentation is essential for measuring left ventricular function indices. Segmentation of one or several images requires an initial guess of the contour. It is hypothesized here that creating an initial guess by first…

Computer Vision and Pattern Recognition · Computer Science 2015-10-13 Yael Petrank , Nahum Smirin , Yossi Tsadok , Zvi Friedman , Peter Lysiansky , Dan Adam

Three-dimensional cine-MRI is of crucial importance for assessing the cardiac function. Features that describe the anatomy and function of cardiac structures (e.g. Left Ventricle (LV), Right Ventricle (RV), and Myocardium(MC)) are known to…

Computer Vision and Pattern Recognition · Computer Science 2017-09-12 M. Hossein Eybposh , Mohammad Haghir Ebrahim-Abadi , Mohammad Jalilpour-Monesi , Seyed Saman Saboksayr

Accurate delineation of the left ventricle (LV) is an important step in evaluation of cardiac function. In this paper, we present an automatic method for segmentation of the LV in cardiac CT angiography (CCTA) scans. Segmentation is…

Computer Vision and Pattern Recognition · Computer Science 2017-04-20 Majd Zreik , Tim Leiner , Bob D. de Vos , Robbert W. van Hamersvelt , Max A. Viergever , Ivana Isgum

The success of deep convolutional neural networks on image classification and recognition tasks has led to new applications in very diversified contexts, including the field of medical imaging. In this paper we investigate and propose…

Computer Vision and Pattern Recognition · Computer Science 2018-02-14 Alexey A. Novikov , Dimitrios Lenis , David Major , Jiri Hladůvka , Maria Wimmer , Katja Bühler

3D printing has been widely adopted for clinical decision making and interventional planning of Congenital heart disease (CHD), while whole heart and great vessel segmentation is the most significant but time-consuming step in the model…

Image and Video Processing · Electrical Eng. & Systems 2019-07-15 Xiaowei Xu , Tianchen Wang , Dewen Zeng , Yiyu Shi , Qianjun Jia , Haiyun Yuan , Meiping Huang , Jian Zhuang

Magnetic resonance imaging (MRI) is extensively used for diagnosis and image-guided therapeutics. Due to hardware, physical and physiological limitations, acquisition of high-resolution MRI data takes long scan time at high system cost, and…

Medical Physics · Physics 2018-10-17 Qing Lyu , Chenyu You , Hongming Shan , Ge Wang

The 3D volumetric shape of the heart's left ventricle (LV) myocardium (MYO) wall provides important information for diagnosis of cardiac disease and invasive procedure navigation. Many cardiac image segmentation methods have relied on…

Computer Vision and Pattern Recognition · Computer Science 2021-02-23 Meng Ye , Qiaoying Huang , Dong Yang , Pengxiang Wu , Jingru Yi , Leon Axel , Dimitris Metaxas

Automatic segmentation of medical images is an important task for many clinical applications. In practice, a wide range of anatomical structures are visualised using different imaging modalities. In this paper, we investigate whether a…

Computer Vision and Pattern Recognition · Computer Science 2017-04-12 Pim Moeskops , Jelmer M. Wolterink , Bas H. M. van der Velden , Kenneth G. A. Gilhuijs , Tim Leiner , Max A. Viergever , Ivana Išgum

Segmenting the retinal vasculature entails a trade-off between how much of the overall vascular structure we identify vs. how precisely we segment individual vessels. In particular, state-of-the-art methods tend to under-segment faint…

Computer Vision and Pattern Recognition · Computer Science 2019-03-28 Aashis Khanal , Rolando Estrada