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The scale and scope of scholarly articles today are overwhelming human researchers who seek to timely digest and synthesize knowledge. In this paper, we seek to develop natural language processing (NLP) models to accelerate the speed of…

Computation and Language · Computer Science 2020-06-17 Victor Zitian Chen , Felipe Montano-Campos , Wlodek Zadrozny

In this paper, we present a system for information extraction from scientific texts in the Russian language. The system performs several tasks in an end-to-end manner: term recognition, extraction of relations between terms, and term…

Computation and Language · Computer Science 2021-09-15 Elena Bruches , Anastasia Mezentseva , Tatiana Batura

Document-level relation extraction (DocRE) aims to extract semantic relations among entity pairs in a document. Typical DocRE methods blindly take the full document as input, while a subset of the sentences in the document, noted as the…

Computation and Language · Computer Science 2022-03-08 Yiqing Xie , Jiaming Shen , Sha Li , Yuning Mao , Jiawei Han

Recent transformer-based approaches demonstrate promising results on relational scientific information extraction. Existing datasets focus on high-level description of how research is carried out. Instead we focus on the subtleties of how…

Computation and Language · Computer Science 2021-09-23 Ian H. Magnusson , Scott E. Friedman

With the proliferation of research means and computational methodologies, published biomedical literature is growing exponentially in numbers and volume. Cancer cell lines are frequently used models in biological and medical research that…

Computation and Language · Computer Science 2024-02-13 Ellery Smith , Rahel Paloots , Dimitris Giagkos , Michael Baudis , Kurt Stockinger

Developing the required technology to assist medical experts in their everyday activities is currently a hot topic in the Artificial Intelligence research field. Thus, a number of large language models (LLMs) and automated benchmarks have…

Computation and Language · Computer Science 2023-12-04 Iakes Goenaga , Aitziber Atutxa , Koldo Gojenola , Maite Oronoz , Rodrigo Agerri

We address the extraction of mathematical statements and their proofs from scholarly PDF articles as a multimodal classification problem, utilizing text, font features, and bitmap image renderings of PDFs as distinct modalities. We propose…

Artificial Intelligence · Computer Science 2024-10-14 Shrey Mishra , Antoine Gauquier , Pierre Senellart

Event extraction is typically modeled as a multi-class classification problem where event types and argument roles are treated as atomic symbols. These approaches are usually limited to a set of pre-defined types. We propose a novel event…

Computation and Language · Computer Science 2022-03-23 Sijia Wang , Mo Yu , Shiyu Chang , Lichao Sun , Lifu Huang

Biomedical information is growing rapidly in the recent years and retrieving useful data through information extraction system is getting more attention. In the current research, we focus on different aspects of relation extraction…

Computation and Language · Computer Science 2017-07-27 Elham Shahab

The increasing volume of scholarly publications requires advanced tools for efficient knowledge discovery and management. This paper introduces ongoing work on a system using Large Language Models (LLMs) for the semantic extraction of key…

Digital Libraries · Computer Science 2025-10-07 Samy Ateia , Udo Kruschwitz , Melanie Scholz , Agnes Koschmider , Moayad Almohaishi

In clinical research and clinical decision-making, it is important to know if a study changes or only supports the current standards of care for specific disease management. We define such a change as transformative and a support as…

Computation and Language · Computer Science 2021-12-28 Xuanyu Shi , Jian Du

Biomedical evidence synthesis relies on accurate extraction of methodological, laboratory, and outcome variables from full-text research articles, yet these variables are embedded in complex scientific PDFs that make manual abstraction…

Computation and Language · Computer Science 2026-01-22 Pouria Mortezaagha , Joseph Shaw , Bowen Sun , Arya Rahgozar

Evidence-based medicine, the practice in which healthcare professionals refer to the best available evidence when making decisions, forms the foundation of modern healthcare. However, it relies on labour-intensive systematic reviews, where…

Computation and Language · Computer Science 2021-12-13 Jetsun Whitton , Anthony Hunter

Segmenting text into Elemental Discourse Units (EDUs) is a fundamental task in discourse parsing. We present a new simple method for identifying EDU boundaries, and hence segmenting them, based on lexical and character n-gram features,…

Computation and Language · Computer Science 2025-01-15 Mohammadreza Sediqin , Shlomo Engelson Argamon

There is a large number of online documents data sources available nowadays. The lack of structure and the differences between formats are the main difficulties to automatically extract information from them, which also has a negative…

"Keyword Extraction" refers to the task of automatically identifying the most relevant and informative phrases in natural language text. As we are deluged with large amounts of text data in many different forms and content - emails, blogs,…

Computation and Language · Computer Science 2019-08-22 Shibamouli Lahiri

Event extraction involves the detection and extraction of both the event triggers and corresponding event arguments. Existing systems often decompose event extraction into multiple subtasks, without considering their possible interactions.…

Computation and Language · Computer Science 2022-10-18 Huiling You , David Samuel , Samia Touileb , Lilja Øvrelid

Current studies in extractive question answering (EQA) have modeled the single-span extraction setting, where a single answer span is a label to predict for a given question-passage pair. This setting is natural for general domain EQA as…

Computation and Language · Computer Science 2022-07-08 Wonjin Yoon , Richard Jackson , Aron Lagerberg , Jaewoo Kang

Spatial reasoning over text is challenging as the models not only need to extract the direct spatial information from the text but also reason over those and infer implicit spatial relations. Recent studies highlight the struggles even…

Computation and Language · Computer Science 2023-10-26 Roshanak Mirzaee , Parisa Kordjamshidi

The scientific literature is growing exponentially, and professionals are no more able to cope with the current amount of publications. Text mining provided in the past methods to retrieve and extract information from text; however, most of…

Computation and Language · Computer Science 2019-02-27 Nikola Milosevic , Cassie Gregson , Robert Hernandez , Goran Nenadic
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