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Document-level models for information extraction tasks like slot-filling are flexible: they can be applied to settings where information is not necessarily localized in a single sentence. For example, key features of a diagnosis in a…

Computation and Language · Computer Science 2022-05-19 Liyan Tang , Dhruv Rajan , Suyash Mohan , Abhijeet Pradhan , R. Nick Bryan , Greg Durrett

Due to the exponential growth of scientific publications on the Web, there is a pressing need to tag each paper with fine-grained topics so that researchers can track their interested fields of study rather than drowning in the whole…

Digital Libraries · Computer Science 2023-10-24 Yu Zhang , Bowen Jin , Qi Zhu , Yu Meng , Jiawei Han

Event extraction, the technology that aims to automatically get the structural information from documents, has attracted more and more attention in many fields. Most existing works discuss this issue with the token-level multi-label…

Computation and Language · Computer Science 2022-01-11 Zhuo Xu , Yue Wang , Lu Bai , Lixin Cui

This study explores three approaches to processing table data in scientific papers to enhance extractive question answering and develop a software tool for the systematic review process. The methods evaluated include: (1) Optical Character…

Information Retrieval · Computer Science 2025-08-27 Dongyoun Kim , Hyung-do Choi , Youngsun Jang , John Kim

New text as data techniques offer a great promise: the ability to inductively discover measures that are useful for testing social science theories of interest from large collections of text. We introduce a conceptual framework for making…

Machine Learning · Statistics 2018-02-08 Naoki Egami , Christian J. Fong , Justin Grimmer , Margaret E. Roberts , Brandon M. Stewart

In the medical domain, the continuous stream of scientific research contains contradictory results supported by arguments and counter-arguments. As medical expertise occurs at different levels, part of the human agents have difficulties to…

Artificial Intelligence · Computer Science 2016-07-28 Adrian Groza , Oana Popa

Event Argument extraction refers to the task of extracting structured information from unstructured text for a particular event of interest. The existing works exhibit poor capabilities to extract causal event arguments like Reason and…

Computation and Language · Computer Science 2021-05-04 Debanjana Kar , Sudeshna Sarkar , Pawan Goyal

Advancing representation learning in specialized fields like medicine remains challenging due to the scarcity of expert annotations for text and images. To tackle this issue, we present a novel two-stage framework designed to extract…

Computation and Language · Computer Science 2024-07-03 Pablo Messina , René Vidal , Denis Parra , Álvaro Soto , Vladimir Araujo

In this work, we compare two simple methods of tagging scientific publications with labels reflecting their content. As a first source of labels Wikipedia is employed, second label set is constructed from the noun phrases occurring in the…

Computation and Language · Computer Science 2014-11-04 Michał Łopuszyński , Łukasz Bolikowski

We introduce a novel graph-based framework for alleviating key challenges in distantly-supervised relation extraction and demonstrate its effectiveness in the challenging and important domain of biomedical data. Specifically, we propose a…

Machine Learning · Computer Science 2024-04-08 Hao Zhang , Yang Liu , Xiaoyan Liu , Tianming Liang , Gaurav Sharma , Liang Xue , Maozu Guo

Data is a critical element in any discovery process. In the last decades, we observed exponential growth in the volume of available data and the technology to manipulate it. However, data is only practical when one can structure it for a…

Nature has inspired various ground-breaking technological developments in applications ranging from robotics to aerospace engineering and the manufacturing of medical devices. However, accessing the information captured in scientific…

Computation and Language · Computer Science 2020-05-27 Ruben Kruiper , Julian F. V. Vincent , Jessica Chen-Burger , Marc P. Y. Desmulliez , Ioannis Konstas

This paper studies the automated categorization and extraction of scientific concepts from titles of scientific articles, in order to gain a deeper understanding of their key contributions and facilitate the construction of a generic…

Information Retrieval · Computer Science 2017-11-10 Adit Krishnan , Aravind Sankar , Shi Zhi , Jiawei Han

Knowledge base construction is crucial for summarising, understanding and inferring relationships between biomedical entities. However, for many practical applications such as drug discovery, the scarcity of relevant facts (e.g. gene X is…

Computation and Language · Computer Science 2019-07-04 Julien Fauqueur , Ashok Thillaisundaram , Theodosia Togia

One major problem in Natural Language Processing is the automatic analysis and representation of human language. Human language is ambiguous and deeper understanding of semantics and creating human-to-machine interaction have required an…

Computation and Language · Computer Science 2022-06-01 Neslihan Suzen , Alexander N. Gorban , Jeremy Levesley , Evgeny M. Mirkes

The abstract of a scientific paper distills the contents of the paper into a short paragraph. In the biomedical literature, it is customary to structure an abstract into discourse categories like BACKGROUND, OBJECTIVE, METHOD, RESULT, and…

Computation and Language · Computer Science 2020-05-28 Soumya Banerjee , Debarshi Kumar Sanyal , Samiran Chattopadhyay , Plaban Kumar Bhowmick , Parthapratim Das

We present a novel approach to automating the identification of risk factors for diseases from medical literature, leveraging pre-trained models in the bio-medical domain, while tuning them for the specific task. Faced with the challenges…

Computation and Language · Computer Science 2024-07-11 Maxim Rubchinsky , Ella Rabinovich , Adi Shraibman , Netanel Golan , Tali Sahar , Dorit Shweiki

Citation parsing is fundamental for search engines within academia and the protection of intellectual property. Meticulous extraction is further needed when evaluating the similarity of documents and calculating their citation impact.…

Digital Libraries · Computer Science 2018-05-23 Niall Martin Ryan

Selecting which claims to check is a time-consuming task for human fact-checkers, especially from documents consisting of multiple sentences and containing multiple claims. However, existing claim extraction approaches focus more on…

Computation and Language · Computer Science 2024-06-13 Zhenyun Deng , Michael Schlichtkrull , Andreas Vlachos

Remarkable success has been achieved in the last few years on some limited machine reading comprehension (MRC) tasks. However, it is still difficult to interpret the predictions of existing MRC models. In this paper, we focus on extracting…

Computation and Language · Computer Science 2019-09-25 Hai Wang , Dian Yu , Kai Sun , Jianshu Chen , Dong Yu , David McAllester , Dan Roth