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Automated relation extraction (RE) from biomedical literature is critical for many downstream text mining applications in both research and real-world settings. However, most existing benchmarking datasets for bio-medical RE only focus on…

Computation and Language · Computer Science 2022-07-20 Ling Luo , Po-Ting Lai , Chih-Hsuan Wei , Cecilia N Arighi , Zhiyong Lu

Many practical applications of AI in medicine consist of semi-supervised discovery: The investigator aims to identify features of interest at a resolution more fine-grained than that of the available human labels. This is often the scenario…

Computation and Language · Computer Science 2020-04-08 Allen Schmaltz , Andrew Beam

Hashing-based methods seek compact and efficient binary codes that preserve the neighborhood structure in the original data space. For most existing hashing methods, an image is first encoded as a vector of hand-crafted visual feature,…

Computer Vision and Pattern Recognition · Computer Science 2015-07-17 Guoqiang Zhong , Pan Yang , Sijiang Wang , Junyu Dong

Objective: To automatically create large labeled training datasets and reduce the efforts of feature engineering for training accurate machine learning models for clinical information extraction. Materials and Methods: We propose a distant…

Information Retrieval · Computer Science 2018-04-24 Yanshan Wang , Sunghwan Sohn , Sijia Liu , Feichen Shen , Liwei Wang , Elizabeth J. Atkinson , Shreyasee Amin , Hongfang Liu

Text embeddings are useful features in many applications such as semantic search and computing text similarity. Previous work typically trains models customized for different use cases, varying in dataset choice, training objective and…

Kernel-based methods enjoy powerful generalization capabilities in handling a variety of learning tasks. When such methods are provided with sufficient training data, broadly-applicable classes of nonlinear functions can be approximated…

Machine Learning · Statistics 2017-12-29 Fatemeh Sheikholeslami , Dimitris Berberidis , Georgios B. Giannakis

Domain shift is a significant challenge in machine learning, particularly in medical applications where data distributions differ across institutions due to variations in data collection practices, equipment, and procedures. This can…

Machine Learning · Computer Science 2025-06-30 Takumi Okuo , Shinnosuke Matsuo , Shota Harada , Kiyohito Tanaka , Ryoma Bise

Hierarchical neural architectures are often used to capture long-distance dependencies and have been applied to many document-level tasks such as summarization, document segmentation, and sentiment analysis. However, effective usage of such…

Computation and Language · Computer Science 2019-01-29 Ming-Wei Chang , Kristina Toutanova , Kenton Lee , Jacob Devlin

Subgradient algorithms for training support vector machines have been quite successful for solving large-scale and online learning problems. However, they have been restricted to linear kernels and strongly convex formulations. This paper…

Machine Learning · Computer Science 2011-11-04 Sangkyun Lee , Stephen J. Wright

Unsupervised Relation Extraction (RE) aims to identify relations between entities in text, without having access to labeled data during training. This setting is particularly relevant for domain specific RE where no annotated dataset is…

Computation and Language · Computer Science 2023-04-05 Pierre-Yves Genest , Pierre-Edouard Portier , Elöd Egyed-Zsigmond , Laurent-Walter Goix

As patients' access to their doctors' clinical notes becomes common, translating professional, clinical jargon to layperson-understandable language is essential to improve patient-clinician communication. Such translation yields better…

Computation and Language · Computer Science 2019-05-28 Wei-Hung Weng , Yu-An Chung , Peter Szolovits

Self-supervised learning of speech representations has achieved impressive results in improving automatic speech recognition (ASR). In this paper, we show that data selection is important for self-supervised learning. We propose a simple…

Audio and Speech Processing · Electrical Eng. & Systems 2022-04-06 Zhiyun Lu , Yongqiang Wang , Yu Zhang , Wei Han , Zhehuai Chen , Parisa Haghani

Supervised learning-based segmentation methods typically require a large number of annotated training data to generalize well at test time. In medical applications, curating such datasets is not a favourable option because acquiring a large…

Image and Video Processing · Electrical Eng. & Systems 2020-11-20 Krishna Chaitanya , Neerav Karani , Christian F. Baumgartner , Ertunc Erdil , Anton Becker , Olivio Donati , Ender Konukoglu

Since its introduction, unsupervised representation learning has attracted a lot of attention from the research community, as it is demonstrated to be highly effective and easy-to-apply in tasks such as dimension reduction, clustering,…

Machine Learning · Computer Science 2018-11-07 Chin-Chia Michael Yeh , Yan Zhu , Evangelos E. Papalexakis , Abdullah Mueen , Eamonn Keogh

Deep neural networks have gained tremendous success in a broad range of machine learning tasks due to its remarkable capability to learn semantic-rich features from high-dimensional data. However, they often require large-scale labelled…

Computer Vision and Pattern Recognition · Computer Science 2020-07-21 Hu Wang , Guansong Pang , Chunhua Shen , Congbo Ma

With an exponential explosive growth of various digital text information, it is challenging to efficiently obtain specific knowledge from massive unstructured text information. As one basic task for natural language processing (NLP),…

Computation and Language · Computer Science 2020-03-27 Yan Xiao , Yaochu Jin , Ran Cheng , Kuangrong Hao

Case-based Reasoning (CBR) on high-dimensional and heterogeneous data is a trending yet challenging and computationally expensive task in the real world. A promising approach is to obtain low-dimensional hash codes representing cases and…

Information Retrieval · Computer Science 2022-06-30 Qi Zhang , Liang Hu , Chongyang Shi , Ke Liu , Longbing Cao

Nearest neighbors search is a fundamental problem in various research fields like machine learning, data mining and pattern recognition. Recently, hashing-based approaches, e.g., Locality Sensitive Hashing (LSH), are proved to be effective…

Information Retrieval · Computer Science 2012-05-15 Yue Lin , Deng Cai , Cheng Li

We present a set of novel neural supervised and unsupervised approaches for determining the readability of documents. In the unsupervised setting, we leverage neural language models, whereas in the supervised setting, three different neural…

Computation and Language · Computer Science 2021-03-12 Matej Martinc , Senja Pollak , Marko Robnik-Šikonja

Current state-of-the-art relation extraction methods typically rely on a set of lexical, syntactic, and semantic features, explicitly computed in a pre-processing step. Training feature extraction models requires additional annotated…

Computation and Language · Computer Science 2019-06-10 Christoph Alt , Marc Hübner , Leonhard Hennig
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