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An important property of chordal graphs is that these graphs are characterized by existence of perfect elimination orderings on their vertex sets. In this paper, we generalize the notion of perfect elimination orderings to signed graphs,…

Combinatorics · Mathematics 2010-07-06 Koji Nuida

Generating novel molecules with optimal properties is a crucial step in many industries such as drug discovery. Recently, deep generative models have shown a promising way of performing de-novo molecular design. Although graph generative…

Machine Learning · Computer Science 2018-11-27 Rim Assouel , Mohamed Ahmed , Marwin H Segler , Amir Saffari , Yoshua Bengio

Graph classification has practical applications in diverse fields. Recent studies show that graph-based machine learning models are especially vulnerable to adversarial perturbations due to the non i.i.d nature of graph data. By adding or…

Machine Learning · Computer Science 2020-09-15 Zhidong Gao , Rui Hu , Yanmin Gong

The concept of directed strongly regular graphs was introduced by Duval in his paper, A Directed Graph Version of Strongly Regular Graphs. Duval also provided several construction methods for directed strongly regular graphs. The directed…

Combinatorics · Mathematics 2013-11-05 Francis Adams , Alexandra Gendreau , Oktay Olmez , Sung Yell Song

In this survey we overview known results on the strong subgraph $k$-connectivity and strong subgraph $k$-arc-connectivity of digraphs. After an introductory section, the paper is divided into four sections: basic results, algorithms and…

Discrete Mathematics · Computer Science 2018-08-09 Yuefang Sun , Gregory Gutin

We propose a novel method to optimize the structure of factor graphs for graph-based inference. As an example inference task, we consider symbol detection on linear inter-symbol interference channels. The factor graph framework has the…

Information Theory · Computer Science 2023-06-02 Lukas Rapp , Luca Schmid , Andrej Rode , Laurent Schmalen

We investigate graphs that can be represented as vertex intersections of horizontal and vertical paths in a grid, the so called $B_0$-VPG graphs. Recognizing this class is an NP-complete problem. Although, there exists a polynomial time…

Combinatorics · Mathematics 2015-11-02 L. Alcón , F. Bonomo , M. P. Mazzoleni

An efficient algorithm is presented to compute the characteristic polynomial of a threshold graph. Threshold graphs were introduced by Chv\'atal and Hammer, as well as by Henderson and Zalcstein in 1977. A threshold graph is obtained from a…

Data Structures and Algorithms · Computer Science 2015-03-03 Martin Fürer

Graphs are fundamental data structures which concisely capture the relational structure in many important real-world domains, such as knowledge graphs, physical and social interactions, language, and chemistry. Here we introduce a powerful…

Machine Learning · Computer Science 2018-03-12 Yujia Li , Oriol Vinyals , Chris Dyer , Razvan Pascanu , Peter Battaglia

Through recognizing causal subgraphs, causal graph learning (CGL) has risen to be a promising approach for improving the generalizability of graph neural networks under out-of-distribution (OOD) scenarios. However, the empirical successes…

Machine Learning · Computer Science 2025-07-02 Yujia Yin , Tianyi Qu , Zihao Wang , Yifan Chen

We present a simple iterative strategy for measuring the connection strength between a pair of vertices in a graph. The method is attractive in that it has a linear complexity and can be easily parallelized. Based on an analysis of the…

Discrete Mathematics · Computer Science 2009-09-24 Jie Chen , Ilya Safro

A random intersection graph is constructed by independently assigning a subset of a given set of objects $W,$ to each vertex of the vertex set $V$ of a simple graph $G.$ There is an edge between two vertices of $V,$ iff their respective…

Probability · Mathematics 2008-09-09 Bhupendra Gupta

Graph-structured data appears frequently in domains including chemistry, natural language semantics, social networks, and knowledge bases. In this work, we study feature learning techniques for graph-structured inputs. Our starting point is…

Machine Learning · Computer Science 2017-09-26 Yujia Li , Daniel Tarlow , Marc Brockschmidt , Richard Zemel

Feature generation is an open topic of investigation in graph machine learning. In this paper, we study the use of graph homomorphism density features as a scalable alternative to homomorphism numbers which retain similar theoretical…

Machine Learning · Computer Science 2021-04-12 Paul Beaujean , Florian Sikora , Florian Yger

Heterogeneous graphs are present in various domains, such as social networks, recommendation systems, and biological networks. Unlike homogeneous graphs, heterogeneous graphs consist of multiple types of nodes and edges, each representing…

Social and Information Networks · Computer Science 2024-10-17 Hritaban Ghosh , Chen Changyu , Arunesh Sinha , Shamik Sural

For a flexible labeling of a graph, it is possible to construct infinitely many non-equivalent realizations keeping the distances of connected points constant. We give a combinatorial characterization of graphs that have flexible labelings.…

Combinatorics · Mathematics 2019-09-17 Georg Grasegger , Jan Legerský , Josef Schicho

In extremal combinatorics, it is common to focus on structures that are minimal with respect to a certain property. In particular, critical and list-critical graphs occupy a prominent place in graph coloring theory. Stiebitz, Tuza, and…

Combinatorics · Mathematics 2026-02-27 Anton Bernshteyn , Hemanshu Kaul , Jeffrey A. Mudrock , Gunjan Sharma

A graph H is strongly immersed in G if H is obtained from G by a sequence of vertex splittings (i.e., lifting some pairs of incident edges and removing the vertex) and edge removals. Equivalently, vertices of H are mapped to distinct…

Combinatorics · Mathematics 2014-11-04 Zdenek Dvorak , Paul Wollan

An asteroidal triple is a stable set of three vertices such that each pair is connected by a path avoiding the neighborhood of the third vertex. Asteroidal triples play a central role in a classical characterization of interval graphs by…

Discrete Mathematics · Computer Science 2008-12-30 Kathie Cameron , Chinh Hoàng , Benjamin Lévêque

Chord diagrams on circles and their intersection graphs (also known as circle graphs) have been intensively studied, and have many applications to the study of knots and knot invariants, among others. However, chord diagrams on more general…

Combinatorics · Mathematics 2007-05-23 Thomas Fleming , Blake Mellor