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Discovering the underlying structures present in large real world graphs is a fundamental scientific problem. In this paper we show that a graph's clique tree can be used to extract a hyperedge replacement grammar. If we store an ordering…

Social and Information Networks · Computer Science 2016-08-11 Salvador Aguiñaga , Rodrigo Palacios , David Chiang , Tim Weninger

The application of network techniques to the analysis of neural data has greatly improved our ability to quantify and describe these rich interacting systems. Among many important contributions, networks have proven useful in identifying…

Quantitative Methods · Quantitative Biology 2018-06-14 Ann E. Sizemore , Jennifer Phillips-Cremins , Robert Ghrist , Danielle S. Bassett

Neuroscience is undergoing a period of rapid experimental progress and expansion. New mathematical tools, previously unknown in the neuroscience community, are now being used to tackle fundamental questions and analyze emerging data sets.…

Neurons and Cognition · Quantitative Biology 2016-12-28 Carina Curto

Cryptographic approaches, such as secure multiparty computation, can be used to compute in a secure manner the function of a distributed graph without centralizing the data of each participant. However, the output of the protocol itself can…

Cryptography and Security · Computer Science 2024-12-09 Sofiane Azogagh , Zelma Aubin Birba , Josée Desharnais , Sébastien Gambs , Marc-Olivier Killijian , Nadia Tawbi

We introduce a mapping between graphs and pure quantum bipartite states and show that the associated entanglement entropy conveys non-trivial information about the structure of the graph. Our primary goal is to investigate the family of…

Quantum Physics · Physics 2012-02-24 Silvano Garnerone , Paolo Giorda , Paolo Zanardi

A fundamental question in search-guided AI: what topology should guide Monte Carlo Tree Search (MCTS) in puzzle solving? Prior work applied topological features to guide MCTS in ARC-style tasks using grid topology -- the Laplacian spectral…

Computational Engineering, Finance, and Science · Computer Science 2025-11-04 Mirco A. Mannucci

Graph Neural Networks (GNNs) have shown remarkable success across various scientific fields, yet their adoption in critical decision-making is often hindered by a lack of interpretability. Recently, intrinsically interpretable GNNs have…

Machine Learning · Computer Science 2025-10-07 Cheng Xin , Fan Xu , Xin Ding , Jie Gao , Jiaxin Ding

Let $N$ local decision makers in a sensor network communicate with their neighbors to reach a decision \emph{consensus}. Communication is local, among neighboring sensors only, through noiseless or noisy links. We study the design of the…

Information Theory · Computer Science 2007-07-13 Soummya Kar , Saeed Aldosari , José M. F. Moura

We propose a new framework for the recognition of online handwritten graphics. Three main features of the framework are its ability to treat symbol and structural level information in an integrated way, its flexibility with respect to…

Computer Vision and Pattern Recognition · Computer Science 2017-09-20 Frank Julca-Aguilar , Harold Mouchère , Christian Viard-Gaudin , Nina S. T. Hirata

Visualization of the adjacency matrix enables us to capture macroscopic features of a network when the matrix elements are aligned properly. Community structure, a network consisting of several densely connected components, is a…

Physics and Society · Physics 2023-07-11 Masaki Ochi , Tatsuro Kawamoto

We introduce TopoNets, end-to-end probabilistic deep networks for modeling semantic maps with structure reflecting the topology of large-scale environments. TopoNets build a unified deep network spanning multiple levels of abstraction and…

Robotics · Computer Science 2020-03-12 Kaiyu Zheng , Andrzej Pronobis

Inferring topological and geometrical information from data can offer an alternative perspective on machine learning problems. Methods from topological data analysis, e.g., persistent homology, enable us to obtain such information,…

Computer Vision and Pattern Recognition · Computer Science 2018-02-19 Christoph Hofer , Roland Kwitt , Marc Niethammer , Andreas Uhl

Graphs, such as social networks, word co-occurrence networks, and communication networks, occur naturally in various real-world applications. Analyzing them yields insight into the structure of society, language, and different patterns of…

Social and Information Networks · Computer Science 2019-08-22 Palash Goyal , Emilio Ferrara

Analysing Web graphs has applications in determining page ranks, fighting Web spam, detecting communities and mirror sites, and more. This study is however hampered by the necessity of storing a major part of huge graphs in the external…

Data Structures and Algorithms · Computer Science 2011-09-07 Szymon Grabowski , Wojciech Bieniecki

Hypergraphs serve as an effective tool widely adopted to characterize higher-order interactions in complex systems. The most intuitive and commonly used mathematical instrument for representing a hypergraph is the incidence matrix, in which…

Social and Information Networks · Computer Science 2026-04-22 Junhao Bian , Yilin Bi , Tao Zhou

Can we use machine learning to compress graph data? The absence of ordering in graphs poses a significant challenge to conventional compression algorithms, limiting their attainable gains as well as their ability to discover relevant…

Machine Learning · Computer Science 2023-09-26 Giorgos Bouritsas , Andreas Loukas , Nikolaos Karalias , Michael M. Bronstein

In this paper, we study cryptography from a geometrical viewpoint. Let N be a network, we endow N with a natural Grothendieck topology. We use geometric representations of cohomological classes to define encryptions protocols. Link to link…

Category Theory · Mathematics 2014-09-18 Aristide Tsemo

Network architecture design is very important for the optimization of industrial networks. The type of network architecture can be divided into small-scale network and large-scale network according to its scale. Graph theory is an efficient…

Social and Information Networks · Computer Science 2022-09-20 Chao Dong , Xiaoxiong Xiong , Qiulin Xue , Zhengzhen Zhang , Kai Niu , Ping Zhang

Designing algorithms that generate networks with a given degree sequence while varying both subgraph composition and distribution of subgraphs around nodes is an important but challenging research problem. Current algorithms lack control of…

Physics and Society · Physics 2015-12-07 Martin Ritchie , Luc Berthouze , Istvan Z Kiss

Recent algorithmic developments have enabled computers to automatically determine and prove the capacity regions of small hypergraph networks under network coding. A structural theory relating network coding problems of different sizes is…

Information Theory · Computer Science 2017-04-07 Congduan Li , Steven Weber , John MacLaren Walsh