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Recently, many graph matching methods that incorporate pairwise constraint and that can be formulated as a quadratic assignment problem (QAP) have been proposed. Although these methods demonstrate promising results for the graph matching…

Computer Vision and Pattern Recognition · Computer Science 2018-07-27 Fudong Wang , Nan Xue , Yipeng Zhang , Xiang Bai , Gui-Song Xia

The explosion of data available in life sciences is fueling an increasing demand for expressive models and computational methods. Graph transformation is a model for dynamic systems with a large variety of applications. We introduce a novel…

We propose an extension to the transformer neural network architecture for general-purpose graph learning by adding a dedicated pathway for pairwise structural information, called edge channels. The resultant framework - which we call…

Machine Learning · Computer Science 2022-06-06 Md Shamim Hussain , Mohammed J. Zaki , Dharmashankar Subramanian

Graph Auto-Encoders (GAEs) are powerful tools for graph representation learning. In this paper, we develop a novel Hierarchical Cluster-based GAE (HC-GAE), that can learn effective structural characteristics for graph data analysis. To this…

Machine Learning · Computer Science 2024-05-24 Zhuo Xu , Lu Bai , Lixin Cui , Ming Li , Yue Wang , Edwin R. Hancock

Nuclei classification is a critical step in computer-aided diagnosis with histopathology images. In the past, various methods have employed graph neural networks (GNN) to analyze cell graphs that model inter-cell relationships by…

Computer Vision and Pattern Recognition · Computer Science 2024-02-21 Wei Lou , Guanbin Li , Xiang Wan , Haofeng Li

Graph transformers are the state-of-the-art for learning from graph-structured data and are empirically known to avoid several pitfalls of message-passing architectures. However, there is limited theoretical analysis on why these models…

Machine Learning · Statistics 2026-03-19 Nil Ayday , Lingchu Yang , Debarghya Ghoshdastidar

The graph Hilbert transform (GHT) is a key tool in constructing analytic signals and extracting envelope and phase information in graph signal processing. However, its utility is limited by confinement to the graph Fourier domain, a fixed…

Signal Processing · Electrical Eng. & Systems 2025-09-23 Daxiang Li , Zhichao Zhang

Contemporary graph learning algorithms are not well-defined for large molecules since they do not consider the hierarchical interactions among the atoms, which are essential to determine the molecular properties of macromolecules. In this…

Machine Learning · Computer Science 2023-08-02 Nhat Khang Ngo , Truong Son Hy , Risi Kondor

Recent video codecs with multiple separable transforms can achieve significant coding gains using asymmetric trigonometric transforms (DCTs and DSTs), because they can exploit diverse statistics of residual block signals. However, they add…

Image and Video Processing · Electrical Eng. & Systems 2025-05-30 Amir Said , Hilmi E. Egilmez , Yung-Hsuan Chao

Graph transformers have gained popularity in various graph-based tasks by addressing challenges faced by traditional Graph Neural Networks. However, the quadratic complexity of self-attention operations and the extensive layering in graph…

Machine Learning · Computer Science 2023-09-20 Reza Shirkavand , Heng Huang

Medical applications like Computed Tomography (CT) or Magnetic Resonance Tomography (MRT) often require an efficient scalable representation of their huge output volumes in the further processing chain of medical routine. A downscaled…

Image and Video Processing · Electrical Eng. & Systems 2023-01-13 Daniela Lanz , André Kaup

Graph Representation Learning (GRL) is an influential methodology, enabling a more profound understanding of graph-structured data and aiding graph clustering, a critical task across various domains. The recent incursion of attention…

Machine Learning · Computer Science 2023-08-15 Shuo Han , Jiacheng Liu , Jiayun Wu , Yinan Chen , Li Tao

Lossless compression of dynamic 2D+t and 3D+t medical data is challenging regarding the huge amount of data, the characteristics of the inherent noise, and the high bit depth. Beyond that, a scalable representation is often required in…

Image and Video Processing · Electrical Eng. & Systems 2023-02-08 Daniela Lanz , André Kaup

Recently, graph neural networks (GNNs) have been shown powerful capacity at modeling structural data. However, when adapted to downstream tasks, it usually requires abundant task-specific labeled data, which can be extremely scarce in…

Machine Learning · Computer Science 2022-03-04 Yupeng Hou , Binbin Hu , Wayne Xin Zhao , Zhiqiang Zhang , Jun Zhou , Ji-Rong Wen

Offline reinforcement learning (RL) is a challenging task, whose objective is to learn policies from static trajectory data without interacting with the environment. Recently, offline RL has been viewed as a sequence modeling problem, where…

Machine Learning · Computer Science 2023-03-08 Shengchao Hu , Li Shen , Ya Zhang , Dacheng Tao

The transformer architecture has shown remarkable success in various domains, such as natural language processing and computer vision. When it comes to graph learning, transformers are required not only to capture the interactions between…

Machine Learning · Computer Science 2024-01-30 Van Thuy Hoang , O-Joun Lee

Fault classification in industrial machinery is vital for enhancing reliability and reducing downtime, yet it remains challenging due to the variability of vibration patterns across diverse operating conditions. This study introduces a…

Machine Learning · Computer Science 2025-04-15 Moirangthem Tiken Singh

Constructing appropriate representations of molecules lies at the core of numerous tasks such as material science, chemistry and drug designs. Recent researches abstract molecules as attributed graphs and employ graph neural networks (GNN)…

Machine Learning · Computer Science 2021-07-29 Jianwen Chen , Shuangjia Zheng , Ying Song , Jiahua Rao , Yuedong Yang

This paper studies the problem of learning the large-scale Gaussian graphical models that are multivariate totally positive of order two ($\text{MTP}_2$). By introducing the concept of bridge, which commonly exists in large-scale sparse…

Machine Learning · Computer Science 2023-10-02 Xiwen Wang , Jiaxi Ying , Daniel P. Palomar

Graph Transformers have recently attracted attention for molecular property prediction by combining the inductive biases of graph neural networks (GNNs) with the global receptive field of Transformers. However, many existing hybrid…

Machine Learning · Computer Science 2026-04-09 Yi Yang , Ovidiu Daescu