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Recent developments in many-body potential energy representation via deep learning have brought new hopes to addressing the accuracy-versus-efficiency dilemma in molecular simulations. Here we describe DeePMD-kit, a package written in…

Computational Physics · Physics 2018-05-23 Han Wang , Linfeng Zhang , Jiequn Han , Weinan E

By combining ab initio quantum mechanics calculation and Drude model, electron temperature and lattice temperature dependent electron thermal conductivity is calculated and implemented into a multiscale model of laser material interaction,…

Computational Physics · Physics 2016-11-07 Pengfei Ji , Yuwen Zhang

We evaluate the impact of inference model on uncertainties when using continuous wave Optically Detected Magnetic Resonance (ODMR) measurements to infer temperature. Our approach leverages a probabilistic feedforward inference model…

Instrumentation and Detectors · Physics 2025-04-15 Shraddha Rajpal , Zeeshan Ahmed , Tyrus Berry

We present a data-efficient, multiscale framework for predicting the density profiles of confined fluids at the nanoscale. While accurate density estimates require prohibitively long timescales that are inaccessible by ab initio molecular…

Computational Physics · Physics 2025-09-11 Bugra Yalcin , Ishan Nadkarni , Jinu Jeong , Chenxing Liang , Narayana R. Aluru

Dissipative particle dynamics (DPD) is a relatively new technique which has proved successful in the simulation of complex fluids. We caution that for the equilibrium achieved by the DPD simulation of a simple fluid the temperature depends…

Statistical Mechanics · Physics 2009-10-30 C. A. Marsh , J. M. Yeomans

Atomistic spin model simulations are immensely useful in determining temperature dependent magnetic prop- erties, but are known to give the incorrect dependence of the magnetization on temperature compared to exper- iment owing to their…

Mesoscale and Nanoscale Physics · Physics 2015-05-12 R. F. L. Evans , U. Atxitia , R. W. Chantrell

Machine-learning-based interatomic potential energy surface (PES) models are revolutionizing the field of molecular modeling. However, although much faster than electronic structure schemes, these models suffer from costly computations via…

Computational Physics · Physics 2022-08-08 Denghui Lu , Wanrun Jiang , Yixiao Chen , Linfeng Zhang , Weile Jia , Han Wang , Mohan Chen

This paper presents a novel methodology for fast simulation and analysis of transient heat transfer. The proposed methodology is suitable for real-time applications owing to (i) establishing the solution method from the viewpoint of…

Computational Engineering, Finance, and Science · Computer Science 2021-12-30 Jinao Zhang , Sunita Chauhan

Field emission coupled with molecular dynamics simulation (FEcMD) software package is a computational tool for studying atomic structure evolution, structural deformation, phase transitions, recrystallization as well as electron emission…

Computational Physics · Physics 2026-01-22 Bing Xiao , Nan Li , Wenqian Kong , Rui Chu , Hongyu Zhang , Guodong Meng , Kai Wu , Yonghong Cheng

From nano-scale heat transfer point of view, currently one of the most interesting and challenging tasks is to quantitatively analyzing phonon mode specific transport properties in solid materials, which plays vital role in many emerging…

Mesoscale and Nanoscale Physics · Physics 2015-12-23 Yanguang Zhou , Ming Hu

The recently published DeePMD model (https://github.com/deepmodeling/deepmd-kit), based on a deep neural network architecture, brings the hope of solving the time-scale issue which often prevents the application of first principle molecular…

Computational Physics · Physics 2019-10-23 Aris Marcolongo , Tobias Binninger , Federico Zipoli , Teodoro Laino

Data-driven thermal predictors for 3D-ICs are often trained from scratch for each chip design using many high-fidelity finite-element simulations, leading to high data-generation cost and costly cross-design reuse. We propose Therm-FM, a…

Computational Engineering, Finance, and Science · Computer Science 2026-05-26 Zhen Huang , Haiyang Xin , Wenkai Yang , Yangbo Wei , Zhiping Yu , Yu Zhang , Wei W. Xing , Ting-Jung Lin , Lei He

Introduction of polarizability in classical molecular simulations holds the promise to increase accuracy as well as prediction power to computer modeling. To introduce polarizability in a straight-forward way one strategy is based on Drude…

Chemical Physics · Physics 2013-11-11 Roman Shevchuk , Francesco Rao

First-principles molecular dynamics simulation based on a plane wave/pseudopotential implementation of density functional theory is adopted to investigate atomic scale energy transport for semiconductors (silicon and germanium). By imposing…

Computational Physics · Physics 2016-02-02 Pengfei Ji , Yuwen Zhang

Machine-learned interatomic potentials (MLIPs) show promise in accurately describing the physical properties of materials, but there is a need for a higher throughput method of validation. Here, we demonstrate using that MLIPs and molecular…

Materials Science · Physics 2023-03-07 Dennis S. Kim , Michael Xu , James M. LeBeau

The widely used Doyler-Fuller-Newman (DFN) model for lithium-ion batteries is too computationally expensive for certain applications, which has motivated the appearance of a plethora of simpler models. These models are usually posed in an…

Chemical Physics · Physics 2021-05-03 Ferran Brosa Planella , Muhammad Sheikh , W. Dhammika Widanage

Using collision driven discrete molecular dynamics (DMD), we investigate the thermodynamics and dynamics of systems of 500 dumbbell molecules interacting by a purely repulsive ramp-like discretized potential, consisting of $n$ steps of…

Soft Condensed Matter · Physics 2009-11-11 Paulo A. Netz , Sergey Buldyrev , Marcia C. Barbosa , H. E. Stanley

Understanding thermal stress evolution in metal additive manufacturing (AM) is crucial for producing high-quality components. Recent advancements in machine learning (ML) have shown great potential for modeling complex multiphysics problems…

Machine Learning · Computer Science 2024-12-30 R. Sharma , Y. B. Guo

The dynamic properties of fluid, including density, surface tension, diffusivity and viscosity, are temperature-dependent and can significantly influence the flow dynamics of mesoscopic non-isothermal systems. To capture the correct…

Computational Physics · Physics 2020-07-21 Kaixuan Zhang , Jie Li , Shuo Chen , Yang Liu

Temperature programmed desorption (TPD) is a well-known technique to study gas-surface processes, and it is characterized by two main quantities: the adsorbate binding energy and the pre-exponential factor. While the former has been well…

Astrophysics of Galaxies · Physics 2025-08-06 S. Pantaleone , L. Tinacci , V. Bariosco , A. Rimola , C. Ceccarelli , P. Ugliengo