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We present an interactive visualization system for exploring named entities and their relationships across document collections. The system is designed around a graph-based representation that integrates three types of nodes: documents,…

Human-Computer Interaction · Computer Science 2025-12-10 Uroš Šmajdek , Ciril Bohak

Dependency trees help relation extraction models capture long-range relations between words. However, existing dependency-based models either neglect crucial information (e.g., negation) by pruning the dependency trees too aggressively, or…

Computation and Language · Computer Science 2018-09-28 Yuhao Zhang , Peng Qi , Christopher D. Manning

Document-Level Biomedical Relation Extraction (Bio-RE) aims to identify relations between biomedical entities within extensive texts, serving as a crucial subfield of biomedical text mining. Existing Bio-RE methods struggle with…

Computation and Language · Computer Science 2025-01-10 Yufei Shang , Yanrong Guo , Shijie Hao , Richang Hong

The growing demand for structured knowledge has led to great interest in relation extraction, especially in cases with limited supervision. However, existing distance supervision approaches only extract relations expressed in single…

Computation and Language · Computer Science 2017-08-16 Chris Quirk , Hoifung Poon

Graph-based neural network models are producing strong results in a number of domains, in part because graphs provide flexibility to encode domain knowledge in the form of relational structure (edges) between nodes in the graph. In…

Machine Learning · Computer Science 2020-11-09 Daniel D. Johnson , Hugo Larochelle , Daniel Tarlow

Detecting keywords in texts is important for many text mining applications. Graph-based methods have been commonly used to automatically find the key concepts in texts, however, relevant information provided by embeddings has not been…

Computation and Language · Computer Science 2022-05-05 Jorge A. V. Tohalino , Thiago C. Silva , Diego R. Amancio

Generating a long, coherent text such as a paragraph requires a high-level control of different levels of relations between sentences (e.g., tense, coreference). We call such a logical connection between sentences as a (paragraph) flow. In…

Computation and Language · Computer Science 2019-09-02 Dongyeop Kang , Hiroaki Hayashi , Alan W Black , Eduard Hovy

Many models learn representations of knowledge graph data by exploiting its low-rank latent structure, encoding known relations between entities and enabling unknown facts to be inferred. To predict whether a relation holds between…

Machine Learning · Computer Science 2021-01-19 Carl Allen , Ivana Balažević , Timothy Hospedales

Past work in relation extraction mostly focuses on binary relation between entity pairs within single sentence. Recently, the NLP community has gained interest in relation extraction in entity pairs spanning multiple sentences. In this…

Computation and Language · Computer Science 2019-01-15 Pankaj Gupta , Subburam Rajaram , Hinrich Schütze , Bernt Andrassy , Thomas Runkler

Advances in Visually Rich Document Understanding (VrDU) have enabled information extraction and question answering over documents with complex layouts. Two tropes of architectures have emerged -- transformer-based models inspired by LLMs,…

Computation and Language · Computer Science 2024-01-08 Dongsheng Wang , Zhiqiang Ma , Armineh Nourbakhsh , Kang Gu , Sameena Shah

Document-level relation extraction (DocRE) aims to identify semantic labels among entities within a single document. One major challenge of DocRE is to dig decisive details regarding a specific entity pair from long text. However, in many…

Computation and Language · Computer Science 2023-02-14 Zhichao Duan , Xiuxing Li , Zhenyu Li , Zhuo Wang , Jianyong Wang

We develop Process Execution Graphs (PEG), a document-level representation of real-world wet lab biochemistry protocols, addressing challenges such as cross-sentence relations, long-range coreference, grounding, and implicit arguments. We…

Computation and Language · Computer Science 2021-04-15 Ronen Tamari , Fan Bai , Alan Ritter , Gabriel Stanovsky

In this study, we investigate using graph neural network (GNN) representations to enhance contextualized representations of pre-trained language models (PLMs) for keyphrase extraction from lengthy documents. We show that augmenting a PLM…

Computation and Language · Computer Science 2023-05-17 Roberto Martínez-Cruz , Debanjan Mahata , Alvaro J. López-López , José Portela

Most research in reading comprehension has focused on answering questions based on individual documents or even single paragraphs. We introduce a neural model which integrates and reasons relying on information spread within documents and…

Computation and Language · Computer Science 2022-09-28 Nicola De Cao , Wilker Aziz , Ivan Titov

In recent years, there has been an increasing number of frameworks developed for biomedical entity and relation extraction. This research effort aims to address the accelerating growth in biomedical publications and the intricate nature of…

Computation and Language · Computer Science 2024-08-14 Minh Nguyen , Phuong Le

Cross-document Relation Extraction aims to predict the relation between target entities located in different documents. In this regard, the dominant models commonly retain useful information for relation prediction via bridge entities,…

Computation and Language · Computer Science 2024-06-25 Hao Yue , Shaopeng Lai , Chengyi Yang , Liang Zhang , Junfeng Yao , Jinsong Su

Given the recent advances and progress in Natural Language Processing (NLP), extraction of semantic relationships has been at the top of the research agenda in the last few years. This work has been mainly motivated by the fact that…

Computation and Language · Computer Science 2020-04-30 Epaminondas Kapetanios , Vijayan Sugumaran , Anastassia Angelopoulou

In this paper, we propose an approach for Relationship Extraction (RE) based on labeled graph kernels. The kernel we propose is a particularization of a random walk kernel that exploits two properties previously studied in the RE…

Computation and Language · Computer Science 2013-02-21 Gonçalo Simões , Helena Galhardas , David Matos

Decision-making usually takes five steps: identifying the problem, collecting data, extracting evidence, identifying pro and con arguments, and making decisions. Focusing on extracting evidence, this paper presents a hybrid model that…

Information Retrieval · Computer Science 2021-02-04 Patrick Abels , Zahra Ahmadi , Sophie Burkhardt , Benjamin Schiller , Iryna Gurevych , Stefan Kramer

3D scene graph prediction aims to abstract complex 3D environments into structured graphs consisting of objects and their pairwise relationships. Existing approaches typically adopt object-centric graph neural networks, where relation edge…

Computer Vision and Pattern Recognition · Computer Science 2025-11-20 Yanni Ma , Hao Liu , Yulan Guo , Theo Gevers , Martin R. Oswald