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Complex networks have established themselves along the last years as being particularly suitable and flexible for representing and modeling several complex natural and human-made systems. At the same time in which the structural intricacies…

Computational Physics · Physics 2007-09-19 Luis Enrique Correa da Rocha , Luciano da Fontoura Costa

When inhibitory neurons constitute about 40% of neurons they could have an important antinociceptive role, as they would easily regulate the level of activity of other neurons. We consider a simple network of cortical spiking neurons with…

Neurons and Cognition · Quantitative Biology 2014-01-28 Fernando Montani , Emilia B. Deleglise , Osvaldo A. Rosso

Mutualistic networks have been shown to involve complex patterns of interactions among animal and plant species. The architecture of these webs seems to pervade some of their robust and fragile behaviour. Recent work indicates that there is…

Populations and Evolution · Quantitative Biology 2016-12-07 Sergi Valverde , Jose Montoya , Lucas Joppa , Ricard Sole

The olfactory system employs responses of an ensemble of odorant receptors (ORs) to sense molecules and to generate olfactory percepts. Here we hypothesized that ORs can be viewed as 3D spatial filters that extract molecular features…

Machine Learning · Computer Science 2024-12-13 Sergey Shuvaev , Khue Tran , Khristina Samoilova , Cyrille Mascart , Alexei Koulakov

Social insects provide an excellent platform to investigate flow of information in regulatory systems since their successful social organization is essentially achieved by effective information transfer through complex connectivity patterns…

Populations and Evolution · Quantitative Biology 2014-03-19 Anjan K. Nandi , Annagiri Sumana , Kunal Bhattacharya

Systems of dynamical interactions between competing species can be used to model many complex systems, and can be mathematically described by {\em random} networks. Understanding how patterns of activity arise in such systems is important…

Adaptation and Self-Organizing Systems · Physics 2016-01-21 Nick McCullen , Thomas Wagenknecht

Understanding the relation between cortical neuronal network structure and neuronal activity is a fundamental unresolved question in neuroscience, with implications to our understanding of the mechanism by which neuronal networks evolve…

Extracellular recordings of single neurons in primary and secondary somatosensory cortices of monkeys in vivo have shown that their firing rate can increase, decrease, or remain constant in different cells, as the external stimulus…

Neurons and Cognition · Quantitative Biology 2012-03-06 Jing Kang , Hugh P. C. Robinson , Jianfeng Feng

Realizations of low firing rates in neural networks usually require globally balanced distributions among excitatory and inhibitory links, while feasibility of temporal coding is limited by neuronal millisecond precision. We show that…

Neurons and Cognition · Quantitative Biology 2015-06-16 Roni Vardi , Amir Goldental , Hagar Marmari , Haya Brama , Edward Stern , Shira Sardi , Pinhas Sabo , Ido Kanter

The animals, in particular insects (Drosophila melanogaster), response towards odor stimuli in nature can be established by measuring the dynamic of the odor response. Such an approach is innovative since responses to odors were tested only…

Quantitative Methods · Quantitative Biology 2009-07-20 Agnieszka Ruebenbauer

Odor detection underpins food safety, environmental monitoring, medical diagnostics, and many more fields. The current artificial sensors developed for odor detection struggle with complex mixtures while non-invasive recordings lack…

Machine Learning · Computer Science 2025-08-14 Matin Hassanloo , Ali Zareh , Mehmet Kemal Özdemir

Several firing patterns experimentally observed in neural populations have been successfully correlated to animal behavior. Population bursting, hereby regarded as a period of high firing rate followed by a period of quiescence, is…

Cell Behavior · Quantitative Biology 2015-05-19 Anca Radulescu

In this paper we study the dynamical behavior of Boolean networks with firing memory, namely Boolean networks whose vertices are updated synchronously depending on their proper Boolean local transition functions so that each vertex remains…

Discrete Mathematics · Computer Science 2022-04-25 Eric Goles , Fabiola Lobos , Gonzalo A. Ruz , Sylvain Sené

Many physical, biological, and social phenomena can be described by cascades taking place on a network. Often, the activity can be empirically observed, but not the underlying network of interactions. In this paper we offer three…

Social and Information Networks · Computer Science 2017-07-24 Sushrut Ghonge , Dervis Can Vural

Fluid dynamics, and flight in particular, is a domain where organisms challenge our understanding of its physics. Integrating the current knowledge of animal flight, we propose to revisit the use of live animals to study physical phenomena.…

Fluid Dynamics · Physics 2024-09-17 Ariane Gayout , David Lentink

We study the collective dynamics of an ensemble of coupled identical FitzHugh--Nagumo elements in their excitable regime. We show that collective firing, where all the elements perform their individual firing cycle synchronously, can be…

Statistical Mechanics · Physics 2015-06-05 Claudio J. Tessone , Damián H. Zanette

Naturally occurring networks exhibit quantitative features revealing underlying growth mechanisms. Numerous network mechanisms have recently been proposed to reproduce specific properties such as degree distributions or clustering…

Quantitative Methods · Quantitative Biology 2009-11-10 Manuel Middendorf , Etay Ziv , Chris Wiggins

The speed of firing pattern propagation in a synfire chain, composed of non-leaky integrate-and-fire neurons, and assuming homogenous connection delays, is studied. An explicit relation, relating the propagation speed to the connecting…

Biological Physics · Physics 2007-05-23 Baktash Babadi

In epidemiological modelling, dynamics on networks, and in particular adaptive and heterogeneous networks have recently received much interest. Here we present a detailed analysis of a previously proposed model that combines heterogeneity…

Physics and Society · Physics 2016-09-21 Hui Yang , Tim Rogers , Thilo Gross

The olfactory system of male moths is exquisitely sensitive to pheromones emitted by females and transported in the environment by atmospheric turbulence. Moths respond to minute amounts of pheromones and their behavior is sensitive to the…

Quantitative Methods · Quantitative Biology 2014-11-14 Antonio Celani , Emmanuel Villermaux , Massimo Vergassola