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An $H$-graph is one representable as the intersection graph of connected subgraphs of a suitable subdivision of a fixed graph $H$, introduced by Bir\'{o}, Hujter and Tuza (1992). An $H$-graph is proper if the representing subgraphs of $H$…

The Graph Motif problem was introduced in 2006 in the context of biological networks. It consists of deciding whether or not a multiset of colors occurs in a connected subgraph of a vertex-colored graph. Graph Motif has been mostly analyzed…

A well-studied coloring problem is to assign colors to the edges of a graph $G$ so that, for every pair of vertices, all edges of at least one shortest path between them receive different colors. The minimum number of colors necessary in…

In recent years many algorithms have been developed for finding patterns in graphs and networks. A disadvantage of these algorithms is that they use subgraph isomorphism to determine the support of a graph pattern; subgraph isomorphism is a…

Many variations of the classical graph coloring model have been intensively studied due to their multiple applications; scheduling problems and aircraft assignments, for instance, motivate the robust coloring problem. This model gets to…

The rise of graph analytic systems has created a need for ways to measure and compare the capabilities of these systems. Graph analytics present unique scalability difficulties. The machine learning, high performance computing, and visual…

We investigate a fundamental vertex-deletion problem called (Induced) Subgraph Hitting: given a graph $G$ and a set $\mathcal{F}$ of forbidden graphs, the goal is to compute a minimum-sized set $S$ of vertices of $G$ such that $G-S$ does…

Representing graphs by their homomorphism counts has led to the beautiful theory of homomorphism indistinguishability in recent years. Moreover, homomorphism counts have promising applications in database theory and machine learning, where…

Graphs are widely used to model complicated data semantics in many application domains. In this paper, two novel and efficient algorithms Fast-ON and Fast-P are proposed for solving the subgraph isomorphism problem. The two algorithms are…

Given a graph $G$, the maximal induced subgraphs problem asks to enumerate all maximal induced subgraphs of $G$ that belong to a certain hereditary graph class. While its optimization version, known as the minimum vertex deletion problem in…

Register allocation, which is a crucial phase of a good optimizing compiler, relies on graph coloring. Hence, an efficient graph coloring algorithm is of paramount importance. In this work we try to learn a good heuristic for coloring…

The graph isomorphism problem is theoretically interesting and also has many practical applications. The best known classical algorithms for graph isomorphism all run in time super-polynomial in the size of the graph in the worst case. An…

A code design problem for memory devises with restricted state transitions is formulated as a combinatorial optimization problem that is called a subgraph domatic partition (subDP) problem. If any neighbor set of a given state transition…

In this work, we study the problem of index coding from graph homomorphism perspective. We show that the minimum broadcast rate of an index coding problem for different variations of the problem such as non-linear, scalar, and vector index…

For graphs $G$ and $H$, a \emph{homomorphism} from $G$ to $H$ is an edge-preserving mapping from the vertex set of $G$ to the vertex set of $H$. For a fixed graph $H$, by \textsc{Hom($H$)} we denote the computational problem which asks…

In the multicoloring problem, also known as ($a$:$b$)-coloring or $b$-fold coloring, we are given a graph G and a set of $a$ colors, and the task is to assign a subset of $b$ colors to each vertex of G so that adjacent vertices receive…

Graph pattern matching is a routine process for a wide variety of applications such as social network analysis. It is typically defined in terms of subgraph isomorphism which is NP-Complete. To lower its complexity, many extensions of graph…

This paper presents the novel `uniqueness tree' algorithm, as one possible method for determining whether two finite, undirected graphs are isomorphic. We prove that the algorithm has polynomial time complexity in the worst case, and that…

In this paper, we investigate the $k$-path coloring problem, a variant of vertex coloring arising in the context of integrated circuit manufacturing. In this setting, typical industrial instances exhibit a `tree-like' structure. We exploit…

In the Properly Colored Spanning Tree problem, we are given an edge-colored undirected graph and the goal is to find a spanning tree in which any two adjacent edges have distinct colors. Since finding such a tree is NP-hard in general,…