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SfePy (Simple Finite Elements in Python) is a framework for solving various kinds of problems (mechanics, physics, biology, ...) described by partial differential equations in two or three space dimensions by the finite element method. The…

Computational Engineering, Finance, and Science · Computer Science 2014-04-30 Robert Cimrman

Developing optical systems for free-space applications requires simulation tools that accurately capture turbulence-induced wavefront distortions and support gradient-based optimization. Here we introduce TurPy, a GPU-accelerated, fully…

Modern rendering libraries provide unprecedented realism, producing real-time photorealistic 3D graphics on commodity hardware. Visual fidelity, however, comes at the cost of increased complexity and difficulty of usage, with many rendering…

Graphics · Computer Science 2020-12-08 Radu Alexandru Rosu , Sven Behnke

To execute scientific computing programs such as deep learning at high speed, GPU acceleration is a powerful option. With the recent advancements in web technologies, interfaces like WebGL and WebGPU, which utilize GPUs on the client side…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-03-04 Masatoshi Hidaka , Tatsuya Harada

Deep learning models have become increasingly computationally intensive, requiring extensive computational resources and time for both training and inference. A significant contributing factor to this challenge is the uniform computational…

Machine Learning · Computer Science 2023-12-21 Mrinal Mathur , Sergey Plis

Pyserini is an easy-to-use Python toolkit that supports replicable IR research by providing effective first-stage retrieval in a multi-stage ranking architecture. Our toolkit is self-contained as a standard Python package and comes with…

Information Retrieval · Computer Science 2021-02-22 Jimmy Lin , Xueguang Ma , Sheng-Chieh Lin , Jheng-Hong Yang , Ronak Pradeep , Rodrigo Nogueira

Adoption of deep neural networks in fields such as economics or finance has been constrained by the lack of interpretability of model outcomes. This paper proposes a generative neural network architecture - the parameter encoder neural…

Machine Learning · Statistics 2021-06-11 Johann Pfitzinger

The overarching goal of Explainable AI is to develop systems that not only exhibit intelligent behaviours, but also are able to explain their rationale and reveal insights. In explainable machine learning, methods that produce a high level…

Artificial Intelligence · Computer Science 2020-05-06 Xiuyi Fan , Siyuan Liu , Thomas C. Henderson

Existing Python libraries and tools lack the ability to efficiently compute statistical test results for large datasets in the presence of missing values. This presents an issue as soon as constraints on runtime and memory availability…

Mathematical Software · Computer Science 2025-05-02 Fabian Woller , Lis Arend , Christian Fuchsberger , Markus List , David B. Blumenthal

Probabilistic graphical models, such as Markov random fields (MRF), exploit dependencies among random variables to model a rich family of joint probability distributions. Sophisticated inference algorithms, such as belief propagation (BP),…

Social and Information Networks · Computer Science 2020-04-22 Yifei Liu , Chao Chen , Xi Zhang , Sihong Xie

The deep learning language of choice these days is Python; measured by factors such as available libraries and technical support, it is hard to beat. At the same time, software written in lower-level programming languages like C++ retain…

Computation and Language · Computer Science 2024-08-23 Thamme Gowda , Roman Grundkiewicz , Elijah Rippeth , Matt Post , Marcin Junczys-Dowmunt

PoPPy is a Point Process toolbox based on PyTorch, which achieves flexible designing and efficient learning of point process models. It can be used for interpretable sequential data modeling and analysis, e.g., Granger causality analysis of…

Machine Learning · Computer Science 2019-10-14 Hongteng Xu

We present new algorithms for inference in credal networks --- directed acyclic graphs associated with sets of probabilities. Credal networks are here interpreted as encoding strong independence relations among variables. We first present a…

Artificial Intelligence · Computer Science 2013-01-07 Jose Carlos Ferreira da Rocha , Fabio Gagliardi Cozman

Magpy is a C++ accelerated Python package for modelling and simulating the magnetic dynamics of nano-sized particles. Nanoparticles are modelled as a system of three-dimensional macrospins and simulated with a set of coupled stochastic…

Computational Physics · Physics 2018-01-25 Oliver Laslett , Jonathon Waters , Hans Fangohr , Ondrej Hovorka

We introduce Tree-AMP, standing for Tree Approximate Message Passing, a python package for compositional inference in high-dimensional tree-structured models. The package provides a unifying framework to study several approximate message…

Machine Learning · Statistics 2023-04-19 Antoine Baker , Benjamin Aubin , Florent Krzakala , Lenka Zdeborová

SpectraPy is an Astropy affiliated package for spectroscopic data reduction. It collects algorithms and methods for data reduction of astronomical spectra obtained by through-slits spectrographs. It has been created to fill the gap in…

Instrumentation and Methods for Astrophysics · Physics 2023-02-10 Marco Fumana

We present a novel verification technique to prove interesting properties of a class of array programs with a symbolic parameter N denoting the size of arrays. The technique relies on constructing two slightly different versions of the same…

Programming Languages · Computer Science 2021-07-05 Supratik Chakraborty , Ashutosh Gupta , Divyesh Unadkat

Optimising deep learning inference across edge devices and optimisation targets such as inference time, memory footprint and power consumption is a key challenge due to the ubiquity of neural networks. Today, production deep learning…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-08-05 Perry Gibson , José Cano

Animal cells are both encapsulated and subdivided by lipid bilayer membranes. Beyond just acting as boundaries, these membranes' shapes influence the function of cells and their compartments. Physically, membranes are two-dimensional fluids…

Soft Condensed Matter · Physics 2023-03-23 George Dadunashvili , Timon Idema

Neural networks are one of the most popular approaches for many natural language processing tasks such as sentiment analysis. They often outperform traditional machine learning models and achieve the state-of-art results on most tasks.…

Computation and Language · Computer Science 2017-08-15 Tao Yu , Christopher Hidey , Owen Rambow , Kathleen McKeown