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The stochastic protein kinetic equations can be stiff for certain parameters, which makes their numerical simulation rely on very small time step sizes, resulting in large computational cost and accumulated round-off errors. For such…

Numerical Analysis · Mathematics 2014-11-14 Lijin Wang

In the process of intelligently segmenting foods in images using deep neural networks for diet management, data collection and labeling for network training are very important but labor-intensive tasks. In order to solve the difficulties of…

Computer Vision and Pattern Recognition · Computer Science 2021-07-21 D. Park , J. Lee , J. Lee , K. Lee

Mechanical pain (or mechanical algesia) can both be a vital mechanism warning us for dangers or an undesired medical symptom important to mitigate. Thus, a comprehensive understanding of the different mechanisms of this type of pain is…

Biological Physics · Physics 2021-10-07 Tom Vincent-Dospital , Renaud Toussaint , Knut Jørgen Måløy

The incredible thermo-mechanical properties of biological materials arise from the microscopic scale due to a complex hierarchical mechanism, regulated by microinstabilities at the molecular level. The description of such complex structures…

Biological Physics · Physics 2022-10-26 Luca Bellino

We present a method for computing locally varying nonlinear mechanical properties in particle simulations of amorphous solids. Plastic rearrangements outside a probed region are suppressed by introducing an external field that directly…

Soft Condensed Matter · Physics 2023-07-18 Jörg Rottler , Céline Ruscher , Peter Sollich

We study the static and dynamical properties of DNA in the vicinity of its melting transition, i.e. the separation of the two strands upon heating. The investigation is based on a simple mechanical model which includes the helicoidal…

Statistical Mechanics · Physics 2007-06-19 Maria Barbi , Stefano Lepri , Michel Peyrard , Nikos Theodorakopoulos

A stochastic deformation of a thermodynamic symplectic structure is studied. The stochastic deformation procedure is analogous to the deformation of an algebra of observables like deformation quantization, but for an imaginary deformation…

Statistical Mechanics · Physics 2009-01-08 P. O. Kazinski

This article is concerned with bending plate theory for thermoelastic diffusion materials under Green-Naghdi theory. First, we present the basic equations which characterize the bending of thin thermoelastic diffusion plates for type II and…

Analysis of PDEs · Mathematics 2021-03-22 Moncef Aouadi , Francesca Passarella , Vincenzo Tibullo

Estimating the free energy, as well as other thermodynamic observables, is a key task in lattice field theories. Recently, it has been pointed out that deep generative models can be used in this context [1]. Crucially, these models allow…

High Energy Physics - Lattice · Physics 2022-09-21 Kim A. Nicoli , Christopher Anders , Lena Funcke , Tobias Hartung , Karl Jansen , Pan Kessel , Shinichi Nakajima , Paolo Stornati

Using formal asymptotic methods we derive a free boundary problem representing one of the simplest mathematical descriptions of the growth and death of a tumour or other biological tissue. The mathematical model takes the form of a closed…

Tissues and Organs · Quantitative Biology 2019-07-16 Joe Eyles , John F. King , Vanessa Styles

We construct a simple thermodynamic model to describe the melting of a supported metal nanoparticle with a spherically curved free surface both with and without surface melting. We use the model to investigate the results of recent…

Materials Science · Physics 2007-05-23 S. C. Hendy

Two-body dissipation due to chemical reactions occurs in both ultracold fermionic and bosonic molecular gases. Despite recent advances in achieving quantum degeneracy, the loss dynamics are typically described phenomenologically using rate…

Quantum Gases · Physics 2025-06-10 Xin-Yuan Gao , Yangqian Yan

Mathematical modeling of real-world physical systems requires the consistent combination of a multitude of physical laws and phenomenological models. This challenging task can be greatly simplified by hierarchically decomposing systems into…

Systems and Control · Electrical Eng. & Systems 2025-03-03 Markus Lohmayer , Owen Lynch , Sigrid Leyendecker

A non-Fourier thermal transport regime characterizes the heat conduction in solids with internal structure. Several thermodynamic theories attempt to explain the separation from the Fourier regime in such kind of systems. Here we develop a…

Classical Physics · Physics 2021-06-03 R. E. Gonzalez-Narvaez , M. López de Haro , F. Vázquez

We study convection in a volumetrically heated fluid which is cooled from both plates and is under rotation through the use of direct numerical simulations. The onset of convection matches similar systems and predictions from asymptotic…

Fluid Dynamics · Physics 2025-03-27 Rodolfo Ostilla-Mónico , Ali Arslan

We study by means of numerical simulations the model of dissipative particle dynamics with energy conservation for the simple case of thermal conduction. It is shown that the model displays correct equilibrium fluctuations and reproduces…

Statistical Mechanics · Physics 2016-08-31 Marisol Ripoll , Pep Español , Matthieu H. Ernst

The objective of this work is to derive the soil water retention from the soil structure without curve-fitting and only using the physical parameters found irrespective of an experimental retention curve. Two key points underlie the work:…

Geophysics · Physics 2014-04-22 V. Y. Chertkov

A simple expression for the composition dependence of the Flory-Huggins interaction parameter of polymer/solvent systems reported earlier is used to model the demixing of polymer solutions into two liquid phases. To this end the system…

Soft Condensed Matter · Physics 2007-05-23 Sergej Stryuk , Bernhard A. Wolf

A Stirling engine of the type used for demonstration purposes has been outfitted with a pair of sensors that measure pressure and piston displacement when the engine is operating with a small temperature difference between the hot and cold…

Classical Physics · Physics 2007-05-23 Randall D. Peters

A reduced model, which can fold both helix and sheet structures, is proposed to study the problem of protein folding. The goal of this model is to find an unbiased effective potential that has included the effects of water and at the same…

Soft Condensed Matter · Physics 2007-05-23 Nan-yow Chen