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The problem of automatically clustering data is an age old problem. People have created numerous algorithms to tackle this problem. The execution time of any of this algorithm grows with the number of input points and the number of cluster…

Machine Learning · Computer Science 2014-12-08 Aditya AV Sastry , Kalyan Netti

We investigate task clustering for deep-learning based multi-task and few-shot learning in a many-task setting. We propose a new method to measure task similarities with cross-task transfer performance matrix for the deep learning scenario.…

Machine Learning · Computer Science 2018-05-21 Mo Yu , Xiaoxiao Guo , Jinfeng Yi , Shiyu Chang , Saloni Potdar , Gerald Tesauro , Haoyu Wang , Bowen Zhou

Spectral clustering refers to a family of unsupervised learning algorithms that compute a spectral embedding of the original data based on the eigenvectors of a similarity graph. This non-linear transformation of the data is both the key of…

Machine Learning · Computer Science 2019-01-30 Nicolas Tremblay , Andreas Loukas

Spectral clustering is one of the most effective clustering approaches that capture hidden cluster structures in the data. However, it does not scale well to large-scale problems due to its quadratic complexity in constructing similarity…

Machine Learning · Computer Science 2019-11-26 Lingfei Wu , Pin-Yu Chen , Ian En-Hsu Yen , Fangli Xu , Yinglong Xia , Charu Aggarwal

Data clustering is a process of arranging similar data into groups. A clustering algorithm partitions a data set into several groups such that the similarity within a group is better than among groups. In this paper a hybrid clustering…

Databases · Computer Science 2012-05-25 Ravindra Jain

Many clustering problems in computer vision and other contexts are also classification problems, where each cluster shares a meaningful label. Subspace clustering algorithms in particular are often applied to problems that fit this…

Machine Learning · Computer Science 2017-09-15 John Lipor , Laura Balzano

Co-clustering is a specific type of clustering that addresses the problem of finding groups of objects without necessarily considering all attributes. This technique has shown to have more consistent results in high-dimensional sparse data…

Machine Learning · Computer Science 2021-10-28 Yuri Santos , Jônata Tyska , Vania Bogorny

Process discovery algorithms automatically extract process models from event logs, but high variability often results in complex and hard-to-understand models. To mitigate this issue, trace clustering techniques group process executions…

Machine Learning · Computer Science 2025-12-11 Jari Peeperkorn , Johannes De Smedt , Jochen De Weerdt

Genome wide comparisons between enteric bacteria yield large sets of conserved putative regulatory sites on a gene by gene basis that need to be clustered into regulons. Using the assumption that regulatory sites can be represented as…

Biological Physics · Physics 2009-11-07 Erik van Nimwegen , Mihaela Zavolan , Nikolaus Rajewsky , Eric D. Siggia

Correlation clustering is a flexible framework for partitioning data based solely on pairwise similarity or dissimilarity information, without requiring the number of clusters as input. However, in many practical scenarios, these pairwise…

Machine Learning · Computer Science 2025-12-11 Linus Aronsson , Morteza Haghir Chehreghani

In this paper we are going to introduce a new nearest neighbours based approach to clustering, and compare it with previous solutions; the resulting algorithm, which takes inspiration from both DBscan and minimum spanning tree approaches,…

Data Structures and Algorithms · Computer Science 2014-07-14 Marcello La Rocca

This report presents the implementation of a protein sequence comparison algorithm specifically designed for speeding up time consuming part on parallel hardware such as SSE instructions, multicore architectures or graphic boards. Three…

Quantitative Methods · Quantitative Biology 2008-12-18 Van Hoa Nguyen , Dominique Lavenier

Common clustering algorithms require multiple scans of all the data to achieve convergence, and this is prohibitive when large databases, with data arriving in streams, must be processed. Some algorithms to extend the popular K-means method…

Applications · Statistics 2017-12-22 Giacomo Aletti , Alessandra Micheletti

One basic requirement of many studies is the necessity of classifying data. Clustering is a proposed method for summarizing networks. Clustering methods can be divided into two categories named model-based approaches and algorithmic…

Machine Learning · Computer Science 2013-02-19 Raheleh Namayandeh , Farzad Didehvar , Zahra Shojaei

Clustering is an unsupervised learning problem that aims to partition unlabelled data points into groups with similar features. Traditional clustering algorithms provide limited insight into the groups they find as their main focus is…

Machine Learning · Computer Science 2022-10-18 Connor Lawless , Oktay Gunluk

Determining the interaction partners among protein/domain families poses hard computational problems, in particular in the presence of paralogous proteins. Available approaches aim to identify interaction partners among protein/domain…

Populations and Evolution · Quantitative Biology 2015-01-14 Iman Hajirasouliha , Alexander Schönhuth , David Juan , Alfonso Valencia , S. Cenk Sahinalp

This paper proposes a new paradigm and computational framework for identification of correspondences between sub-structures of distinct composite systems. For this, we define and investigate a variant of traditional data clustering, termed…

Machine Learning · Computer Science 2007-05-23 Zvika Marx , Ido Dagan , Joachim Buhmann

The method of Hol\'y, Sokol and \v{C}ern\'y (Applied Soft Computing, 2017, Vol. 60, p. 752-762) clusters objects based on their incidence in a large number of given sets. The idea is to minimize the occurrence of multiple objects from the…

Artificial Intelligence · Computer Science 2021-02-03 Ondřej Sokol , Vladimír Holý

Clustering is an unsupervised learning technique in which data or objects are grouped into sets based on some similarity measure. Most of the clustering algorithms assume that the main memory is infinite and can accommodate the set of…

Data Structures and Algorithms · Computer Science 2015-05-25 Pankaj Kumar Yadav , Sriniwas Pandey , Sraban Kumar Mohanty

Patchwork learning arises as a new and challenging data collection paradigm where both samples and features are observed in fragmented subsets. Due to technological limits, measurement expense, or multimodal data integration, such patchwork…

Methodology · Statistics 2024-06-21 Lili Zheng , Andersen Chang , Genevera I. Allen