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Strong positional correlations between particles render the diffusion of a tracer particle in a single file anomalous and non-Markovian. While ensemble average observables of tracer particles are nowadays well understood, little is known…

Statistical Mechanics · Physics 2018-11-15 Alessio Lapolla , Aljaz Godec

Sub-diffusion in biological systems is conventionally treated as anomalous, requiring fractional derivatives, heavy-tailed waiting times, or fitted memory kernels. We argue that this anomaly is an artifact of an incomplete phase space.…

Statistical Mechanics · Physics 2026-05-19 Patrick BarAvi

We introduce a class of discrete random walk model driven by global memory effects. At any time the right-left transitions depend on the whole previous history of the walker, being defined by an urn-like memory mechanism. The characteristic…

Statistical Mechanics · Physics 2016-12-28 Adrian A. Budini

We consider different Markovian embedding schemes of non-Markovian stochastic processes that are described by generalized Langevin equations (GLE) and obey thermal detailed balance under equilibrium conditions. At thermal equilibrium…

Statistical Mechanics · Physics 2010-02-08 Peter Siegle , Igor Goychuk , Peter Talkner , Peter Hanggi

Single-file diffusion is a paradigm for strongly correlated classical stochastic many-body dynamics and has widespread applications in soft condensed matter and biophysics. However, exact results for {single-file} systems are sparse and…

Computational Physics · Physics 2020-10-26 Alessio Lapolla , Aljaz Godec

In this work we introduce and characterize a broad class of quantum operations with a unique fixed point, termed quantum ergodic channels. We derive Lindblad-type master equations for these channels in arbitrary finite dimensions and…

Quantum Physics · Physics 2025-03-18 Ritam Basu , Anish Chakraborty , Himanshu Badhani , Mir Alimuddin , Samyadeb Bhattacharya

The definition of memory in operational approaches to quantum non-Markovianity depends on the statistical properties of different sets of outcomes related to successive measurement processes performed over the system of interest. Using…

Quantum Physics · Physics 2021-01-26 Mariano Bonifacio , Adrián A. Budini

The transport equation of active motion is generalised to consider time-fractional dynamics for describing the anomalous diffusion of self-propelled particles observed in many different systems. In the present study, we consider an…

Statistical Mechanics · Physics 2023-10-27 Francisco J. Sevilla , Guillermo Chacón-Acosta , Trifce Sandev

It is quite clear from a wide range of experiments that gating phenomena of ion channels is inherently stochastic. It has been discussed using BD simulations in a recent paper that memory effects in ion transport is negligible, unless the…

Neurons and Cognition · Quantitative Biology 2008-01-25 Sisir Roy , Indranil Mitra , Rodolfo Llinas

In the field of Markov models for image generation, the main idea is to learn how non-trivial images are gradually destroyed by a trivial forward Markov dynamics over the large time window $[0,t]$ converging towards pure noise for $t \to +…

Statistical Mechanics · Physics 2025-01-30 Cecile Monthus

Subdiffusion is a hallmark of complex systems, ranging from protein folding to transport in viscoelastic media. However, despite its pervasiveness, the mechanistic origins of subdiffusion remain contested. Here, we analyze both Markovian…

Soft Condensed Matter · Physics 2025-06-04 Anton Klimek , Benjamin A. Dalton , Roland R. Netz

We theoretically study the transport properties of self-propelled particles on complex structures, such as motor proteins on filament networks. A general master equation formalism is developed to investigate the persistent motion of…

Soft Condensed Matter · Physics 2014-09-19 M. Reza Shaebani , Zeinab Sadjadi , Igor M. Sokolov , Heiko Rieger , Ludger Santen

Inspired by problems in biochemical kinetics, we study statistical properties of an overdamped Langevin process whose friction coefficient depends on the state of a similar, unobserved process. Integrating out the latter, we derive the long…

Statistical Mechanics · Physics 2009-08-13 Golan Bel , Ilya Nemenman

Efficient methods for the description of the non-Markovian dynamics of open systems play an important role in many proposed applications of quantum mechanics. Here we review some of the most important tools that are based on the projection…

Quantum Physics · Physics 2007-07-03 Heinz-Peter Breuer

Non-Markovian dynamics arise when a system is coupled to a bath with finite correlation time, giving rise to memory effects that allow the bath to temporarily store and return excitations. However, how memory modifies irreversibility and…

Statistical Mechanics · Physics 2026-04-29 Ken Funo , Tan Van Vu , Keiji Saito

Consider a system of homogeneous interacting diffusive particles labeled by the nodes of a unimodular Galton-Watson (UGW) tree, where the state of each node evolves like a d-dimensional diffusion whose drift coefficient depends on (the…

Probability · Mathematics 2021-07-19 Daniel Lacker , Kavita Ramanan , Ruoyu Wu

We study the asymptotic behavior of continuous-time, time-inhomogeneous Markovian quantum dynamics in a stationary random environment. Under mild faithfulness and eventually positivity-improving assumptions, the normalized evolution…

Quantum Physics · Physics 2025-09-12 Lubashan Pathirana , Jeffrey Schenker

We present a thermo-kinetic description of anomalous diffusion of single-particles and clusters in a viscoelastic medium in terms of a non-Markovian diffusion equation involving memory functions. The scaling behaviour of these functions is…

Statistical Mechanics · Physics 2007-05-23 I. Santamaria-Holek , J. M. Rubi , A. Gadomski

The nature of diffusion is usually studied for particles or time-evolving systems. Similar in principle, such studies can be conducted by tracking how a given function of observable properties evolves over time-akin to the evolution of…

Statistical Mechanics · Physics 2026-03-10 M. Süzen

We introduce a new method to accurately and efficiently estimate the effective dynamics of collective variables in molecular simulations. Such reduced dynamics play an essential role in the study of a broad class of processes, ranging from…

Statistical Mechanics · Physics 2022-03-28 Hadrien Vroylandt , Ludovic Goudenège , Pierre Monmarché , Fabio Pietrucci , Benjamin Rotenberg
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