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Photoionization modelling allows to follow the transport, the emergence, and the absorption of photons taking into account all important processes in nebular plasmas. Such modelling needs the spatial distribution of density, chemical…

Astrophysics of Galaxies · Physics 2015-03-16 B. Melekh , S. Recchi , G. Hensler , O. Buhajenko

Systems of interacting continuous-time Markov chains are a powerful model class, but inference is typically intractable in high dimensional settings. Auxiliary information, such as noisy observations, is typically only available at discrete…

Machine Learning · Statistics 2026-04-21 Giosue Migliorini , Padhraic Smyth

Modeling shock-to-detonation phenomena in energetic materials (EMs) requires capturing complex physical processes such as strong shocks, rapid changes in microstructural morphology, and nonlinear dynamics of chemical reaction fronts. These…

Machine Learning · Computer Science 2025-10-14 Xinlun Cheng , Bingzhe Chen , Joseph Choi , Yen T. Nguyen , Pradeep Seshadri , Mayank Verma , H. S. Udaykumar , Stephen Baek

In this article, we outline the modeling of a realistic dynamical model for comprehensive description of high energy heavy ion collisions. Comparing theoretical calculations and experimental data at RHIC, we give detailed discussions on the…

Nuclear Theory · Physics 2012-07-10 Chiho Nonaka , Masayuki Asakawa

We use the spectral synthesis code Cloudy to tabulate the properties of gas for an extensive range in redshift (z=0 to 9), temperature (log T [K] = 1 to 9.5), metallicity (log Z/$\mathrm{Z}_{\odot}$ = -4 to +0.5, Z=0), and density (log…

Astrophysics of Galaxies · Physics 2020-08-05 Sylvia Ploeckinger , Joop Schaye

Metal-organic frameworks (MOFs) are porous materials composed of metal ions and organic linkers. Due to their chemical diversity, MOFs can support a broad range of applications in chemical separations. However, the vast amount of structural…

Protein-protein interactions (PPIs) perform important roles on biological functions. Researches of mutants on protein interactions can further understand PPIs. In the past, many researchers have developed databases that stored mutants on…

Biomolecules · Quantitative Biology 2017-08-08 Quanya Liu , Peng Chen , Bing Wang , Jinyan Li

In recent times, the production of multidimensional data in various domains and their storage in array databases has witnessed a sharp increase; this rapid growth in data volumes necessitates compression in array databases. However,…

Databases · Computer Science 2022-11-14 Minsoo Kim , Hyubjin Lee , Yon Dohn Chung

We present a concurrent Monte Carlo (MC) - molecular dynamics (MD) approach to modeling of matter response to excitation of its electronic system. The two methods are combined on-the-fly at each time step in one code, TREKIS-4. The MC model…

Other Condensed Matter · Physics 2023-02-17 N. Medvedev , F. Akhmetov , R. A. Rymzhanov , R. Voronkov , A. E. Volkov

In high energy density physics (HEDP) and inertial confinement fusion (ICF), predictive modeling is complicated by uncertainty in parameters that characterize various aspects of the modeled system, such as those characterizing material…

In this paper we introduce the SchemaDB data-set; a collection of relational database schemata in both sql and graph formats. Databases are not commonly shared publicly for reasons of privacy and security, so schemata are not available for…

Databases · Computer Science 2025-05-30 Cody James Christopher , Kristen Moore , David Liebowitz

We propose a novel approach to approximate numerically shock waves. The method combines the unstructured shock-fitting approach developed in the last decade by some of the authors, with ideas coming from embedded boundary techniques. The…

Numerical Analysis · Mathematics 2024-02-22 Mirco Ciallella , Mario Ricchiuto , Renato Paciorri , Aldo Bonfiglioli

Tunneling ionization is at the core of strong-field and attosecond science. In this paper, we present PyStructureFactor - a general Python code towards the calculation of the structure factor in the tunneling ionization rate of common…

Atomic Physics · Physics 2023-08-10 Shanshan Song , Mingyu Zhu , Hongcheng Ni , Jian Wu

Scientific endeavors such as large astronomical surveys generate databases on the terabyte scale. These, usually multidimensional databases must be visualized and mined in order to find interesting objects or to extract meaningful and…

We present the latest advances of the multiscale approach to radiation damage caused by irradiation of a tissue with energetic ions and report the most recent advances in the calculations of complex DNA damage and the effects of thermal…

Biological Physics · Physics 2015-05-19 E. Surdutovich , A. V. Yakubovich , A. V. Solov'yov

Data analysis and individual policy-level modeling for insurance involves handling large data sets with strong spatiotemporal correlations, non-Gaussian distributions, and complex hierarchical structures. In this research, we demonstrate…

Applications · Statistics 2024-01-02 Christopher Krapu , Mark Borsuk

We introduce Breaking Bad, a large-scale dataset of fractured objects. Our dataset consists of over one million fractured objects simulated from ten thousand base models. The fracture simulation is powered by a recent physically based…

Computer Vision and Pattern Recognition · Computer Science 2022-10-21 Silvia Sellán , Yun-Chun Chen , Ziyi Wu , Animesh Garg , Alec Jacobson

This paper presents the use of a computer application based on a MySQL database, managed by PHP programs, allowing the selection of a heating device using coefficient-based calculus.

Databases · Computer Science 2009-03-10 Tiberiu Marius Karnyanszky

The molecular dynamics simulation code ls1 mardyn is presented. It is a highly scalable code, optimized for massively parallel execution on supercomputing architectures, and currently holds the world record for the largest molecular…

The MARS15(2012) is the latest version of a multi-purpose Monte-Carlo code developed since 1974 for detailed simulation of hadronic and electromagnetic cascades in an arbitrary 3-D geometry of shielding, accelerator, detector and spacecraft…

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