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In electronic health records (EHRs), clustering patients and distinguishing disease subtypes are key tasks to elucidate pathophysiology and aid clinical decision-making. However, clustering in healthcare informatics is still based on…

Machine Learning · Computer Science 2026-04-09 Manar D. Samad , Yina Hou , Shrabani Ghosh

Reliable and energy-efficient wireless data transmission remains a major challenge in resource-constrained wireless neural recording tasks, where data compression is generally adopted to relax the burdens on the wireless data link.…

Information Theory · Computer Science 2016-02-02 Biao Sun , Wenfeng Zhao , Xinshan Zhu

Most previous approaches to Chinese word segmentation formalize this problem as a character-based sequence labeling task where only contextual information within fixed sized local windows and simple interactions between adjacent tags can be…

Computation and Language · Computer Science 2016-12-05 Deng Cai , Hai Zhao

The digitalization of stored information in hospitals now allows for the exploitation of medical data in text format, as electronic health records (EHRs), initially gathered for other purposes than epidemiology. Manual search and analysis…

Electronic Health Records (EHRs) have become the primary form of medical data-keeping across the United States. Federal law restricts the sharing of any EHR data that contains protected health information (PHI). De-identification, the…

Computation and Language · Computer Science 2021-03-26 Abdullah Ahmed , Adeel Abbasi , Carsten Eickhoff

Background. Previous state-of-the-art systems on Drug Name Recognition (DNR) and Clinical Concept Extraction (CCE) have focused on a combination of text "feature engineering" and conventional machine learning algorithms such as conditional…

Computation and Language · Computer Science 2018-06-26 Inigo Jauregi Unanue , Ehsan Zare Borzeshi , Massimo Piccardi

The cost of annotating transcriptions for large speech corpora becomes a bottleneck to maximally enjoy the potential capacity of deep neural network-based automatic speech recognition models. In this paper, we present a new training…

Audio and Speech Processing · Electrical Eng. & Systems 2020-11-06 Jihwan Bang , Heesu Kim , YoungJoon Yoo , Jung-Woo Ha

The use of Electronic Health Records (EHRs) has increased dramatically in the past 15 years, as, it is considered an important source of managing data od patients. The EHRs are primary sources of disease diagnosis and demographic data of…

Machine Learning · Computer Science 2024-04-02 Bushra F. Alsaqer , Alaa F. Alsaqer , Amna Asif

Deep learning has yielded state-of-the-art performance on many natural language processing tasks including named entity recognition (NER). However, this typically requires large amounts of labeled data. In this work, we demonstrate that the…

Computation and Language · Computer Science 2018-02-06 Yanyao Shen , Hyokun Yun , Zachary C. Lipton , Yakov Kronrod , Animashree Anandkumar

Given many recent advanced embedding models, selecting pre-trained word embedding (a.k.a., word representation) models best fit for a specific downstream task is non-trivial. In this paper, we propose a systematic approach, called ETNLP,…

Computation and Language · Computer Science 2019-08-06 Xuan-Son Vu , Thanh Vu , Son N. Tran , Lili Jiang

Neural models with minimal feature engineering have achieved competitive performance against traditional methods for the task of Chinese word segmentation. However, both training and working procedures of the current neural models are…

Computation and Language · Computer Science 2017-04-25 Deng Cai , Hai Zhao , Zhisong Zhang , Yuan Xin , Yongjian Wu , Feiyue Huang

Active learning is a unique abstraction of machine learning techniques where the model/algorithm could guide users for annotation of a set of data points that would be beneficial to the model, unlike passive machine learning. The primary…

Computer Vision and Pattern Recognition · Computer Science 2021-01-08 Vishwesh Nath , Dong Yang , Bennett A. Landman , Daguang Xu , Holger R. Roth

Analysis of longitudinal Electronic Health Record (EHR) data is an important goal for precision medicine. Difficulty in applying Machine Learning (ML) methods, either predictive or unsupervised, stems in part from the heterogeneity and…

Quantitative Methods · Quantitative Biology 2022-04-18 Alan D. Kaplan , Uttara Tipnis , Jean C. Beckham , Nathan A. Kimbrel , David W. Oslin , Benjamin H. McMahon

Uncertainty estimation is crucial for the reliability of safety-critical human and artificial intelligence (AI) interaction systems, particularly in the domain of healthcare engineering. However, a robust and general uncertainty measure for…

Computation and Language · Computer Science 2024-11-19 Zhiyuan Wang , Jinhao Duan , Chenxi Yuan , Qingyu Chen , Tianlong Chen , Yue Zhang , Ren Wang , Xiaoshuang Shi , Kaidi Xu

Electronic Patient Record (EPR) systems contain valuable clinical information, but much of it is trapped in unstructured text, limiting its use for research and decision-making. Large language models can extract such information but require…

Objective: We investigate whether deep learning techniques for natural language processing (NLP) can be used efficiently for patient phenotyping. Patient phenotyping is a classification task for determining whether a patient has a medical…

Active learning is a promising alternative to alleviate the issue of high annotation cost in the computer vision tasks by consciously selecting more informative samples to label. Active learning for object detection is more challenging and…

Computer Vision and Pattern Recognition · Computer Science 2022-04-19 Jiaxi Wu , Jiaxin Chen , Di Huang

Recurrent neural network(RNN) has been broadly applied to natural language processing(NLP) problems. This kind of neural network is designed for modeling sequential data and has been testified to be quite efficient in sequential tagging…

Machine Learning · Computer Science 2016-02-22 Yushi Yao , Zheng Huang

Deep learning has significantly accelerated drug discovery, with 'chemical language' processing (CLP) emerging as a prominent approach. CLP learns from molecular string representations (e.g., Simplified Molecular Input Line Entry Systems…

Biomolecules · Quantitative Biology 2025-01-13 Rıza Özçelik , Francesca Grisoni

Widespread adoption of electronic health records (EHRs) has fueled the development of using machine learning to build prediction models for various clinical outcomes. This process is often constrained by having a relatively small number of…

Computation and Language · Computer Science 2020-05-14 Ethan Steinberg , Ken Jung , Jason A. Fries , Conor K. Corbin , Stephen R. Pfohl , Nigam H. Shah
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