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Besides direct molecular interactions, proteins and nanoparticles embedded in or adsorbed to membranes experience indirect interactions that are mediated by the membranes. These membrane-mediated interactions arise from the membrane…

Soft Condensed Matter · Physics 2024-07-08 Francesco Bonazzi , Thomas R. Weikl

Soft particles suspended in fluids flowing through microchannels are often encountered in biological flows such as cells in vessels. They can deform under flow or when subject to mechanical stresses as they interact with themselves.…

Soft Condensed Matter · Physics 2021-01-19 Danilo P. F. Silva , Rodrigo C. V. Coelho , Margarida M. Telo da Gama , Nuno A. M. Araújo

Microbiology is the science of microbes, particularly bacteria. Many bacteria are motile: they are capable of self-propulsion. Among these, a significant class execute so-called run-and-tumble motion: they follow a fairly straight path for…

Statistical Mechanics · Physics 2012-09-06 M. E. Cates

We study binary mixtures of small active and big passive athermal particles interacting via soft repulsive forces on a frictional substrate. Athermal self propelled particles are known to phase separate into a dense aggregate and a dilute…

Soft Condensed Matter · Physics 2018-07-05 Pritha Dolai , Aditi Simha , Shradha Mishra

Actively propelled particles undergoing dissipative collisions are known to develop a state of spatially distributed coherently moving clusters. For densities larger than a characteristic value clusters grow in time and form a stationary…

Soft Condensed Matter · Physics 2013-04-23 Christoph A. Weber , Florian Thüroff , Erwin Frey

Microswimmers such as E. Coli bacteria accumulate and exhibit an intriguing dynamics near walls, governed by hydrodynamic and steric interactions. Insight into the underlying mechanisms and predominant interactions demand a detailed…

Soft Condensed Matter · Physics 2020-07-03 S. Mahdiyeh Mousavi , Gerhard Gompper , Roland G. Winkler

The aim of this paper is to discuss the mathematical modeling of Brownian active particle systems, a recently popular paradigmatic system for self-propelled particles. We present four microscopic models with different types of repulsive…

Statistical Mechanics · Physics 2022-05-31 M. Bruna , M. Burger , A. Esposito , S. M. Schulz

We discuss a class of models for particulate gels in which the particle contacts are described by an effective interaction combining a two-body attraction and a three-body angular repulsion. Using molecular dynamics, we show how varying the…

Soft Condensed Matter · Physics 2021-08-05 Minaspi Bantawa , Wayan A. Fontaine-Seiler , Peter D. Olmsted , Emanuela Del Gado

During close approaches to planets or stars, the morphological and dynamical properties of rubble-pile small bodies can be modified, and some may catastrophically break up. This phenomenon is of particular interest for understanding the…

Earth and Planetary Astrophysics · Physics 2020-08-26 Yun Zhang , Patrick Michel

The spatio-temporal evolution of a downsized model for a desert dune is observed experimentally in a narrow water flow channel. A particle tracking method reveals that the migration speed of the model dune is one order of magnitude smaller…

Pattern Formation and Solitons · Physics 2010-06-17 Christopher Groh , Ingo Rehberg , Christof A. Kruelle

Biomolecular condensates in cells are often rich in catalytically-active enzymes. This is particularly true in the case of the large enzymatic complexes known as metabolons, which contain different enzymes that participate in the same…

Subcellular Processes · Quantitative Biology 2021-10-20 Vincent Ouazan-Reboul , Jaime Agudo-Canalejo , Ramin Golestanian

We theoretically study mixtures of chemically-interacting particles, which produce or consume a chemical to which they are attracted or repelled, in the most general case of many coexisting species. We find a new class of active phase…

Soft Condensed Matter · Physics 2019-07-15 Jaime Agudo-Canalejo , Ramin Golestanian

In the presence of an obstacle, active particles condensate into a surface "wetting" layer due to persistent motion. If the obstacle is asymmetric, a rectification current arises in addition to wetting. Asymmetric geometries are therefore…

Soft Condensed Matter · Physics 2023-06-06 Mauricio Rojas-Vega , Pablo de Castro , Rodrigo Soto

We consider the hydrodynamic effect of small particles on the dynamics of a much larger particle moving normal to a planar wall in a highly bidisperse dilute colloidal suspension of spheres. The gap $h_0$ between the large particle and the…

Soft Condensed Matter · Physics 2009-11-13 S. Bhattacharya , J. Blawzdziewicz

Interactions between disc-surrounded stars might play a vital role in the formation of planetary systems. Here a first parameter study of the effects of encounters on low-mass discs is presented. The dependence of the mass and angular…

Astrophysics · Physics 2009-11-11 S. Pfalzner , P. Vogel , J. Scharwaechter , C. Olczak

The effect of crowding on the run-and-tumble dynamics of swimmers such as bacteria is studied using a discrete lattice model of mutually excluding particles that move with constant velocity along a direction that is randomized at a rate…

Soft Condensed Matter · Physics 2015-06-16 Rodrigo Soto , Ramin Golestanian

In this paper we consider three classes of interacting particle systems on $\mathbb Z$: independent random walks, the exclusion process, and the inclusion process. We allow particles to switch their jump rate (the rate identifies the type…

Charged colloidal particles trapped at an air--water interface are well known to form an ordered crystal, stabilized by a long ranged repulsion, the details of this repulsion remain something of a mystery, but all experiments performed to…

Soft Condensed Matter · Physics 2016-12-22 Duck-Gyu Lee , Pietro Cicuta , Dominic Vella

We study self-propelled particles with velocity reversal interacting by uniaxial (nematic) alignment within a coarse-grained hydrodynamic theory. Combining analytical and numerical continuation techniques, we show that the physics of this…

Statistical Mechanics · Physics 2016-11-30 Robert Großmann , Fernando Peruani , Markus Bär

We investigate the relation between mobility and diffusivity for Brownian particles under steady shear near the glass transition, using mode coupling approximations. For the two directions perpendicular to the shear direction, the particle…

Soft Condensed Matter · Physics 2009-11-10 Matthias Krüger , Matthias Fuchs