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Medical imaging papers often focus on methodology, but the quality of the algorithms and the validity of the conclusions are highly dependent on the datasets used. As creating datasets requires a lot of effort, researchers often use…

Medical imaging is spearheading the AI transformation of healthcare. Performance reporting is key to determine which methods should be translated into clinical practice. Frequently, broad conclusions are simply derived from mean performance…

Our analysis of recent AI4H publications reveals that, despite a trend toward utilizing open datasets and sharing modeling code, 74% of AI4H papers still rely on private datasets or do not share their code. This is especially concerning in…

Computers and Society · Computer Science 2026-03-05 John Wu , Zhenbang Wu , Jimeng Sun

Medical Imaging (MI) datasets are fundamental to artificial intelligence in healthcare. The accuracy, robustness, and fairness of diagnostic algorithms depend on the data (and its quality) used to train and evaluate the models. MI datasets…

Open-sourcing research publications is a key enabler for the reproducibility of studies and the collective scientific progress of a research community. As all fields of science develop more advanced algorithms, we become more dependent on…

Systems and Control · Electrical Eng. & Systems 2023-08-22 Siqi Zhou , Lukas Brunke , Allen Tao , Adam W. Hall , Federico Pizarro Bejarano , Jacopo Panerati , Angela P. Schoellig

Public AI benchmark results are widely broadcast by model developers as indicators of model quality within a growing and competitive market. However, these advertised scores do not necessarily reflect the traits of interest to those who…

This paper analyses the practice of publishing research data within the Max Planck Society in the year 2020. The central finding of the study is that up to 40\% of the empirical text publications had research data available. The aggregation…

Digital Libraries · Computer Science 2024-02-29 Martin Boosen , Michael Franke , Yves Vincent Grossmann , Sy Dat Ho , Larissa Leiminger , Jan Matthiesen

Academic medical centers are generating an increasing amount of biomedical data and there is an increasing demand for biomedical data for research purposes by research projects, research consortia, companies, and other third parties. At the…

Other Quantitative Biology · Quantitative Biology 2023-02-07 Robert L. Grossman , Maryellen L. Giger , Julie A. Johnson , Jeremy D. Marks , Jessica P. Ridgway , Julian Solway , Walter M. Stadler

Data sharing is fundamental to scientific progress, enhancing transparency, reproducibility, and innovation across disciplines. Despite its growing significance, the variability of data-sharing practices across research fields remains…

Digital Libraries · Computer Science 2025-02-04 Puyu Yang , Giovanni Colavizza

Progress of machine learning in critical care has been difficult to track, in part due to absence of public benchmarks. Other fields of research (such as computer vision and natural language processing) have established various competitions…

Machine Learning · Computer Science 2023-07-19 Seyedmostafa Sheikhalishahi , Vevake Balaraman , Venet Osmani

Medical image analysis studies usually require medical image datasets for training, testing and validation of algorithms. The need is underscored by the deep learning revolution and the dominance of machine learning in recent medical image…

Image and Video Processing · Electrical Eng. & Systems 2019-08-22 Yuval Landau , Nahum Kiryati

Reproducibility, the ability to reproduce the results of published papers or studies using their computer code and data, is a cornerstone of reliable scientific methodology. Studies where results cannot be reproduced by the scientific…

Applications · Statistics 2022-10-03 Xin Xiong , Ivor Cribben

Public data archives are the backbone of modern biological and biomedical research. While archives for biological molecules and structures are well-established, resources for imaging data do not yet cover the full range of spatial and…

Quantitative Methods · Quantitative Biology 2018-11-05 Jan Ellenberg , Jason R Swedlow , Mary Barlow , Charles E Cook , Ardan Patwardhan , Alvis Brazma , Ewan Birney

Concerns about the reproducibility of deep learning research are more prominent than ever, with no clear solution in sight. The relevance of machine learning research can only be improved if we also employ empirical rigor that incorporates…

Machine Learning · Computer Science 2022-10-21 Attila Simko , Anders Garpebring , Joakim Jonsson , Tufve Nyholm , Tommy Löfstedt

To ensure the fairness and trustworthiness of machine learning (ML) systems, recent legislative initiatives and relevant research in the ML community have pointed out the need to document the data used to train ML models. Besides,…

Machine Learning · Computer Science 2024-12-18 Joan Giner-Miguelez , Abel Gómez , Jordi Cabot

Knowledge bases are prevalent in various domains and have been widely used in a large number of real applications such as applications in online encyclopedia, social media, biomedical fields, bibliographical networks. Due to their great…

Databases · Computer Science 2021-07-09 Feixiang Wang , Yixiang Fang , Yan Song , Shuang Li , Xinyun Chen

The need for scholarly open data is ever increasing. While there are large repositories of open access articles and free publication indexes, there are still a few examples of free citation networks and their coverage is partial. One of the…

Digital Libraries · Computer Science 2019-02-12 Angelo Di Iorio , Silvio Peroni , Francesco Poggi

Advances in AI, and especially machine learning, are increasingly drawing research interest and efforts towards predictive process monitoring, the subfield of process mining (PM) that concerns predicting next events, process outcomes and…

Artificial Intelligence · Computer Science 2021-07-06 Hans Weytjens , Jochen De Weerdt

In recent years, discussions of responsible AI practices have seen growing support for "participatory AI" approaches, intended to involve members of the public in the design and development of AI systems. Prior research has identified a…

Human-Computer Interaction · Computer Science 2023-06-19 Lara Groves , Aidan Peppin , Andrew Strait , Jenny Brennan

The reproducibility of scientific research has become a point of critical concern. We argue that openness and transparency are critical for reproducibility, and we outline an ecosystem for open and transparent science that has emerged…

Computers and Society · Computer Science 2018-09-27 Russell A. Poldrack , Krzysztof J. Gorgolewski , Gael Varoquaux
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