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Clinical trials (CTs) often fail due to inadequate patient recruitment. This paper tackles the challenges of CT retrieval by presenting an approach that addresses the patient-to-trials paradigm. Our approach involves two key components in a…

Information Retrieval · Computer Science 2023-07-04 Wojciech Kusa , Óscar E. Mendoza , Petr Knoth , Gabriella Pasi , Allan Hanbury

In clinical research and clinical decision-making, it is important to know if a study changes or only supports the current standards of care for specific disease management. We define such a change as transformative and a support as…

Computation and Language · Computer Science 2021-12-28 Xuanyu Shi , Jian Du

Text alignment finds application in tasks such as citation recommendation and plagiarism detection. Existing alignment methods operate at a single, predefined level and cannot learn to align texts at, for example, sentence and document…

Computation and Language · Computer Science 2020-10-06 Xuhui Zhou , Nikolaos Pappas , Noah A. Smith

Biomedical text mining is becoming increasingly important as the number of biomedical documents and web data rapidly grows. Recently, word representation models such as BERT has gained popularity among researchers. However, it is difficult…

Computation and Language · Computer Science 2023-01-26 Ningyu Zhang , Qianghuai Jia , Kangping Yin , Liang Dong , Feng Gao , Nengwei Hua

The increasing availability of unstructured clinical narratives in electronic health records (EHRs) has created new opportunities for automated disease characterization, cohort identification, and clinical decision support. However,…

Computation and Language · Computer Science 2026-03-03 Fariba Afrin Irany , Sampson Akwafuo

In the face of rapidly expanding online medical literature, automated systems for aggregating and summarizing information are becoming increasingly crucial for healthcare professionals and patients. Large Language Models (LLMs), with their…

Computation and Language · Computer Science 2024-03-07 Niraj Yagnik , Jay Jhaveri , Vivek Sharma , Gabriel Pila

Medical visual question answering (VQA) is a challenging multimodal task, where Vision-Language Pre-training (VLP) models can effectively improve the generalization performance. However, most methods in the medical field treat VQA as an…

Computer Vision and Pattern Recognition · Computer Science 2024-06-21 Jiawei Chen , Dingkang Yang , Yue Jiang , Yuxuan Lei , Lihua Zhang

Textual Question Answering (QA) aims to provide precise answers to user's questions in natural language using unstructured data. One of the most popular approaches to this goal is machine reading comprehension(MRC). In recent years, many…

Computation and Language · Computer Science 2022-02-07 Yang Bai , Daisy Zhe Wang

This paper explores the task of answer-aware questions generation. Based on the attention-based pointer generator model, we propose to incorporate an auxiliary task of language modeling to help question generation in a hierarchical…

Computation and Language · Computer Science 2019-09-02 Wenjie Zhou , Minghua Zhang , Yunfang Wu

Loading models pre-trained on the large-scale corpus in the general domain and fine-tuning them on specific downstream tasks is gradually becoming a paradigm in Natural Language Processing. Previous investigations prove that introducing a…

Computation and Language · Computer Science 2021-09-15 Yao Qiu , Jinchao Zhang , Jie Zhou

Recent work on speech representation models jointly pre-trained with text has demonstrated the potential of improving speech representations by encoding speech and text in a shared space. In this paper, we leverage such shared…

Computation and Language · Computer Science 2023-10-10 Chung-Ming Chien , Mingjiamei Zhang , Ju-Chieh Chou , Karen Livescu

Conversational text-to-SQL aims at converting multi-turn natural language queries into their corresponding SQL (Structured Query Language) representations. One of the most intractable problems of conversational text-to-SQL is modelling the…

Computation and Language · Computer Science 2022-07-27 Yuntao Li , Hanchu Zhang , Yutian Li , Sirui Wang , Wei Wu , Yan Zhang

Randomized controlled trials (RCTs) represent the paramount evidence of clinical medicine. Using machines to interpret the massive amount of RCTs has the potential of aiding clinical decision-making. We propose a RCT conclusion generation…

Computation and Language · Computer Science 2019-10-04 Alexander Te-Wei Shieh , Yung-Sung Chuang , Shang-Yu Su , Yun-Nung Chen

The structured representation for semantic parsing in task-oriented assistant systems is geared towards simple understanding of one-turn queries. Due to the limitations of the representation, the session-based properties such as…

Large language models have exhibited exceptional performance on various Natural Language Processing (NLP) tasks, leveraging techniques such as the pre-training, and instruction fine-tuning. Despite these advances, their effectiveness in…

Computation and Language · Computer Science 2023-06-19 Guangyu Wang , Guoxing Yang , Zongxin Du , Longjun Fan , Xiaohu Li

In most clinical practice settings, there is no rigorous reviewing of the clinical documentation, resulting in inaccurate information captured in the patient medical records. The gold standard in clinical data capturing is achieved via…

Computation and Language · Computer Science 2021-05-25 George Michalopoulos , Helen Chen , Alexander Wong

Clinical natural language processing requires methods that can address domain-specific challenges, such as complex medical terminology and clinical contexts. Recently, large language models (LLMs) have shown promise in this domain. Yet,…

Computation and Language · Computer Science 2025-01-28 Ran Xu , Hejie Cui , Yue Yu , Xuan Kan , Wenqi Shi , Yuchen Zhuang , Wei Jin , Joyce Ho , Carl Yang

The problem of answering questions using knowledge from pre-trained language models (LMs) and knowledge graphs (KGs) presents two challenges: given a QA context (question and answer choice), methods need to (i) identify relevant knowledge…

Computation and Language · Computer Science 2022-12-14 Michihiro Yasunaga , Hongyu Ren , Antoine Bosselut , Percy Liang , Jure Leskovec

Data scarcity is a long-standing and crucial challenge that hinders quick development of task-oriented dialogue systems across multiple domains: task-oriented dialogue models are expected to learn grammar, syntax, dialogue reasoning,…

Computation and Language · Computer Science 2019-08-06 Paweł Budzianowski , Ivan Vulić

Cross-lingual text classification(CLTC) is the task of classifying documents written in different languages into the same taxonomy of categories. This paper presents a novel approach to CLTC that builds on model distillation, which adapts…

Computation and Language · Computer Science 2018-03-29 Ruochen Xu , Yiming Yang
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